SimpleSearch - Line and FST details


Line specific information

 
Line ID 539H01
Vector Used pAC161
Line Availability available as T3 set from NASC (N451733)
Segregation Analysis 50:48:33
Confirmed for Hit At5g65683
Parent of DUPLO pair none
Parent of pair(s) 39791, 83070

Gene hit At5g65683

 
Sequence (A. th genome BLAST matches underlined) 
>08-K020531-022-539-H01-8409
AACCATTTACATTGAATATATCCGGCACTTCAACTCCTCGGCTCAGATCATTCGACGGAA
GCGGCACTGGATGCCGCTCCTCAGCTTCCACATCAGTCACTATCCCATCTCTTCCAACAT
ATGGGATCCTCCCTATAGTGAGAGGAGATCCACAAATAGCAATTAACAATTTTTTTTGAA
TTCAAAAACGTAGAGGTCCGCAGCGATATTAAAAAGCTGCATTACAAAAACATCCCTTGG
GTCGACTGGGACGCCTATGGGATCCTCCCTATAGAGAGACGACAACAAAAATGACTACTT
CCCACTTATATTACAGTGCGAAACTGTAGATGTCCGCAGCGTTATTATACCCAACCACCC
ACTCACACAACACAAGACAGCCCAGAAAACACACTGCCATCATGACAATCCAACGCACTA
CGCCATAAAACGCATCCAACACTTCACACAACAACCCCACCGTCACCCACAAACTAAGCA
GGGAAACACACCACAAAGA
GenBank Accession BX547334 [GenBank]
Graphic View Graphic view of gene At5g65683
Predicted Position of Insertion Chr5:26261614 - go to primer design
BLAST e Value 2e-32
Hit Clone Code (BAC ID) MPA24
Hit Gene Code At5g65683 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Zinc finger (C3HC4-type RING finger) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37