SimpleSearch - Line and FST details


Line specific information

 
Line ID 541B12
Vector Used pAC161
Line Availability available as T3 set from NASC (N451864)
Segregation Analysis 50:44:34
Confirmed for Hit At5g15620
Parent of DUPLO pair none
Parent of pair(s) 96731, 96735, 96739, 96740, 96741

Gene hit At5g15620

 
Sequence (A. th genome BLAST matches underlined) 
>90-K023854-022-541-B12-8409
AGCCATTTACATTGAATATATCCTGAGCAAAATCCATAGACACCAATTTCAGAGAGAATC
TCTTTATACGGTAACTGGCAGGTTCAGCTAATAATCCATCAACAAAATTCTTGAAACTTT
CCCAATGATGGAAAACAACGTTTCGTTTGATAGTAACCAAATTCTGAAAGTTCTTGGAGA
CAAACTTTAAGCACGTAGCCTCCTTTGCCGAAAGAAAAGAAACGATGTGGTAAATAACAT
CGTCTGGTAAATTGCTGAATCTATCCATACTTATCCCAAACCCTATGGGATCCTCCCTAT
AGTGAGACGTATTACTCACTTTTCTAATCGAAACATGAAATCTGAAGCCAACACGAGATT
CAATATTGAAATTGTGATACGATCGACGACGCCTATTCAAGAGCTTTCTGACGCGAATCA
AAGAGGAATTGACGAATAACTATGGGATCCTCCCTATATTGAGAAAAATTAT
GenBank Accession BX891334 [GenBank]
Graphic View Graphic view of gene At5g15620
Predicted Position of Insertion Chr5:5082710 - go to primer design
BLAST e Value 5e-147
Hit Clone Code (BAC ID) T20K14
Hit Gene Code At5g15620 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box/RNI-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX891335 [GenBank]


Last Updated on 10.06.2021 13:37