SimpleSearch - Line and FST details
Line specific information
| Line ID | 541D06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N451882) |
| Segregation Analysis | 50:22:15 |
| Confirmed for Hit | At3g12670 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
| Note |
Gene hit At3g12670
| Sequence (A. th genome BLAST matches underlined) | >44-K020609-022-541-D06-8409 TATTCTCTAATCTCTAGAGTCTGGAACACAAAAATAAATTTACCATGGCTTTGAATTTTA CCGTTTCAGTCCCTTTTTATTTTATTTTCTTACTCACGCCCAATGTTGATGTATTATTTT GAGATTATAAAACATTTGACCAAATAATAAAACTATTTTGATTTGCTTTCAATTTGGGTT TAAATAAGAGTGAGGGTCTCTCTTTTTATCTCATAAACCACCTCCTTGTTGATCCTTGAA GGCCATTTGTGTAAAAAAAAGGAGGGGGTCCGCAATTTTTCCAACACTGGTCATTTTTTT TATCTGCTCCAGAGTCTTTATATTAGATTTAGGGTATATGACACCCCTGCTTCTGGTGCG TAAGTTGGGACAACTCCAACCCCAAAAACCCCACCGGAGGTTGGGAAAAATA |
| GenBank Accession | BX547451 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:4024608 - go to primer design |
| BLAST e Value | 6e-85 |
| Hit Clone Code (BAC ID) | T2E22 |
| Hit Gene Code | At3g12670 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | CTP synthase family protein |
| Insertion Classification | Promoter |
| Confirmation Status | confirmed, show confirmation sequences |
| Other FSTs Supporting this Hit | BX891358 [GenBank] |
Gene hit At2g31650
| Sequence (A. th genome BLAST matches underlined) | >44-K020614-022-541-D06-8409 TCCTTTGCTACTTTGAGCCTTTGTCGTTATACCATTACTAGAGGCCTTCCACGTGTTTCC TCAAGACTTAGAATCAGAGACACGGAGACAACTATGGGAGACTCCCAAATGTGAGGGCTC CGTCTCTTCACGATAAACCAAAAATTTGATCATTCCACGATCATGAACTATATCCTCATC ACATCCATCCCTATATTTGACCTAAGGAAGAATTTAATCATGGGTAGAGGAACAAGCTTT TACATATATCATAGCTCAAAGAACTACCCAACTCATAACTCAAGTAGAGTAGAGAATTAC TTACAGTGTAACGCTTTCTCTCTGCACTATATCCAACAATGGAACCTTCATACCAAAGAG CGTCCAGCGGCCAAAAAACCTATGGGATCCTCCCTATAGTGAG |
| GenBank Accession | BX547452 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:13460878 - go to primer design |
| BLAST e Value | 2e-134 |
| Hit Clone Code (BAC ID) | T9H9 |
| Hit Gene Code | At2g31650 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | homologue of trithorax |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
