SimpleSearch - Line and FST details


Line specific information

 
Line ID 544E01
Vector Used pAC161
Line Availability available as T3 set from NASC (N452177)
Segregation Analysis 50:16:9
Confirmed for Hit At3g55110
Parent of DUPLO pair none
Parent of pair(s) 72191, 72204, 72216, 72225, 72233, 72241, 72249, 72256, 72262, 72267, 72271, 72274, 72276, 72278, 82998, 83004, 83009, 83013, 83016, 83019, 83020
Note

Gene hit At2g29370

 
Sequence (A. th genome BLAST matches underlined) 
>05-K020618-022-544-E01-8409
CCTTTGATCTTTTCAGGGGTTGACGCTCTGTGGAACAAACTCACGTAAGGATCTGGGCTG
AGATTATCAAAGGATCTTACCTA
GenBank Accession FR811931 [GenBank]
Graphic View Graphic view of gene At2g29370
Predicted Position of Insertion Chr2:12606381 - go to primer design
BLAST e Value 8e-04
Hit Clone Code (BAC ID) F16P2
Hit Gene Code At2g29370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAD(P)-binding Rossmann-fold superfamily protein
Insertion Classification CDSi
Confirmation Status failed

Gene hit At3g55110

 
Sequence (A. th genome BLAST matches underlined) 
>05-K020964-022-544-E01-8409
CCATTTCAGTATTTGATGGTACGCTTTTGGCGGAAGTGTCCCATGCTGATGAAGGTTAAG
CTCCTAGATACACTGAGTGGCTCTTCCTGTAACGAAGATAACAGAGTCCACATGCTTGAG
AACAGGACCTGACTTACTTATGCAGCAAGGTATAACTCAATTGAGCAAGTGGGATTGCTT
ATGGATTACGTTAGCTTGGGGTCTCTTCTTTAGGATCTTGTTTTACTTGGGATCCTCCCT
ATAGTGAGTCGTATTACTCATGGGATCGGCCCTATAGGGAGCCACACTGAACTAGCATCT
GAAGCTGTACGAACATAGGCTCTACTACCCGACGCTCAAACCAACGATCAAAAATGTAGT
AGCAGCAAATGCAATGGCGAAAGCAAGTAACTGAGGCATAGACCCTAGAACGTGGGATCC
ACGAAAAAGTGAGTCATATTACGCACAGCAGCGGAATTTGGCAACACAGTCATCGAGGGA
TGAACTCATAATGACACCGACTAAGGCAACCCATTTCATCTTAACATACAATAAA
GenBank Accession BX572244 [GenBank]
Graphic View Graphic view of gene At3g55110
Predicted Position of Insertion Chr3:20425021 - go to primer design
BLAST e Value 8e-106
Hit Clone Code (BAC ID) T15C9
Hit Gene Code At3g55110 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ABC-2 type transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37