SimpleSearch - Line and FST details


Line specific information

 
Line ID 546D06
Vector Used pAC161
Line Availability available as T3 set from NASC (N452362)
Segregation Analysis 50:43:34
Confirmed for Hit At4g10720
Parent of DUPLO pair none
Parent of pair(s) 77085, 77088, 77091, 77093, 77094

Gene hit At4g10720

 
Sequence (A. th genome BLAST matches underlined) 
>44-K020585-022-546-D06-8409
CATTTACATTGAATATATCCTGACCACTATATATTCAATCAATAAATGTTTAGCCGGACA
TATGGGTGTAAAACACTGATAGTTTAAACCGGACAGCACTGATTAACATATGAGGTTTCC
ATCATATTCAATCGATAACCGGACAGGTTTAACCGCTCTATGGGATCCTCCCTATAGTGA
GGTTCTCTGATCCTCCCTATTATCTTAAAAACTTATCCGAAAATGGGGAGAGATGAGAGC
CCCTTCTGAAAAAAAAATGAAAGCACATTTTGATAAAACGACAGATTACGATCCGTCGTA
TTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTC
TACATTCACGTCCAAATGGGGGCTACCAACTCATTGTAGCTCACTATAGGGAGGATCCCA
TAGCCTCACTACAAGGACGACCCCCGAGCCGAAATGGTACCTGCTTAAAAATGAAAGAAC
ATTGTGATTATACGACAAATTACGATCCGTCGGATTTATA
GenBank Accession FR811988 [GenBank]
Graphic View Graphic view of gene At4g10720
Predicted Position of Insertion Chr4:6608563 - go to primer design
BLAST e Value 0.003
Hit Clone Code (BAC ID) T12H20
Hit Gene Code At4g10720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ankyrin repeat family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX650489 [GenBank] BX572338 [GenBank] BX547614 [GenBank] FR811988 [GenBank]


Last Updated on 10.06.2021 13:37