SimpleSearch - Line and FST details


Line specific information

 
Line ID 549G09
Vector Used pAC161
Line Availability available as T3 set from NASC (N452689)
Segregation Analysis 50:48:43
Confirmed for Hit At1g09840
Parent of DUPLO pair none
Parent of pair(s) 5015, 7449, 84637, 84643, 84649, 84653, 84656, 84657, 84658

Gene hit At1g09840

 
Sequence (A. th genome BLAST matches underlined) 
>71-K020633-022-549-G09-8409
NNNTTCGTCTAATTTCCGGAATGAACCATTTACATTGAATATATCCTGGTAAAAGCCACA
TCTTTTTGATAGTATTGCATTGGGATCCCCATGTAGATCATTAGCGTCATCATGAAGATC
CCAGACATCACCGCCTATGGGATCCTCCCTATAGTGAGAGGTCCTAAGGTATGATCTATA
TACTTGATAGGTGTAGAGTTTAACATATATCAATGGCATCAGCTGGTTTGTCCTATTATA
ACTTCTTGATAGAGGATTGACGGTATCAGGCACAACTTCATGGAAAGGATTCGAATAGAC
CTCTTCGTTGTCTGTTCTTGAGAAAAAGCTATGCTTTAAAGCAACGGCATTGGGATGGCC
TATGGGATCCTCCCTATAGTGAGNANNGNGCNACANGCACTGGCGGGTCACCCGCGGGGC
CCGGAAAGCGGCGCAAGCTGGGGAAGCGTCCTTATAAGCTATGGGATCCTCCCGATAGTG
AGCTACAGTGAATTGGTGCCTCCCATTTGGACGTGAATGTAAACAC
GenBank Accession BX547891 [GenBank]
Graphic View Graphic view of gene At1g09840
Predicted Position of Insertion Chr1:3198531 - go to primer design
BLAST e Value 3e-65
Hit Clone Code (BAC ID) F21M12
Hit Gene Code At1g09840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation shaggy-like protein kinase 41
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX547892 [GenBank] BX547891 [GenBank]


Last Updated on 10.06.2021 13:37