SimpleSearch - Line and FST details


Line specific information

 
Line ID 550D06
Vector Used pAC161
Line Availability available as T3 set from NASC (N452746)
Segregation Analysis 50:7:7
Confirmed for Hit At1g15960
Parent of DUPLO pair 12869
Parent of pair(s) none

Gene hit At1g15960

 
Sequence (A. th genome BLAST matches underlined) 
>44-K020729-022-550-D06-8409
GGAGAAGTTATGCGAGAAATTGAAGCAAAAGATATAGGATTCATGGATTTACACGTAGCA
GAATGAAGCTTTGTTTAGTCCAAATCTTGGCAACTATGGGATCCTCCTCTATGTGAGACT
ATGGGACCTCCCTATCTAGGGGAACCTGCATATGTGAGAGTGGGGTACACTGAATTGGTA
GCTCATATTGTCTCTCGCATAGTCTCAGACTGTATATTTTATGAAACGGGGAGACGGGAC
TGACGATGAAATGGGTATCTGGGAATGGTTTCTTCTCTGTGCCCCCGTTTAGATTTCTCT
GCAAACCCGCCGTTTTAACGTGATTGTAAACGCAACAATTTGATTATTCCCTTAGTCAAA
AGATACGGTGATCGCCTTCGTGTTGGGGTAACAGGAAGCGAAAAGATACCCTTTTAACCT
TCAGATTGGTCTGATATAGTGACAAAATCAACGCTCGCATCTTAGGTACGGACAGTTGGA
GCTACCAATTT
GenBank Accession BX572436 [GenBank]
Graphic View Graphic view of gene At1g15960
Predicted Position of Insertion Chr1:5483140 - go to primer design
BLAST e Value 5e-36
Hit Clone Code (BAC ID) T24D18
Hit Gene Code At1g15960 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NRAMP metal ion transporter 6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX572435 [GenBank] BX572436 [GenBank]


Last Updated on 10.06.2021 13:37