SimpleSearch - Line and FST details
Line specific information
| Line ID | 551F03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N452863) |
| Segregation Analysis | 50:31:18 |
| Confirmed for Hit | At2g21520 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 5877, 5886, 5912, 7720, 10475, 69772, 69778, 69788, 69810, 69813 |
Gene hit At2g21520
| Sequence (A. th genome BLAST matches underlined) | >22-K022077-022-551-F03-8409 CGGAATCAGCCATTTACAATTGAATATATCCTGGCTATATATTAATTTTTAGCTCTCTCT GGGACTCTCTTCTATCGCTAGCATCAATTTCAACATGATTGGATACTCATTGTGTCAACC TCGATACAGTGCGTCAATTAGCATTGACAGTCCCTACGCAACCCCCCCTAGTATGTCCTC GACATCCCTCACATCCTCAATGGATACAGAACTCACTCGACCATCACTTTTTCTTCTTCC GCTCTTTTTCTTAAGAGAATGCTTGAACTTAGTAGAGGCATTAATGGCTTTCTTTTTCAA GGAACCGATTCTTGTTCTCCTCTCATCCTCTGAATTCTCAAAATCTGACTTTCTTTCCTT TTTCTCATCACTGCTCAAGAATCCCTCAAAACCTGTAGTGAAAGCTGTTTTGATTTGATG AGACACATTAAAAATTATCTAAAGCAATACACATTATTTAACCAGCTCAACAACATATAT TGAAGACACGAGAAAGCAAAGAGACACAATTTTTAGATTCTCATTATTATATTAGACACA ATTCCAAGTTT |
| GenBank Accession | BX650663 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:9216570 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F3K23 |
| Hit Gene Code | At2g21520 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Sec14p-like phosphatidylinositol transfer family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX650663 [GenBank] |
Gene hit T6J4
| Sequence (A. th genome BLAST matches underlined) | >22-K022302-022-554-F03-8409 NGGTAGTAATTCGGAAATGAGCCATTTACAATTGAATATATCCGGACATGTAGATTTCAC TATATTAGGCCTGATTATTTTACGACTTAATTAACGGTGCCGTTAGGGTTTGATTTTCCT TGGCAATTGAGAAACAAATTCAAAAACAGTGATTTATCACACCATCAATTCGATCTATGG GATCCTCCCTATAGTGAGGCTATGGGATCCTCCCTATGGAGAGGGGGGGGGATCCTCCCT ATAGTGAGTCNTAATTATCCTTAAAAAAAAACCTCACTATAGGGAGGATCCCATAACGTG ACGAAAGGGGGGAACCGAGAACCTCAAGATAGGGAGGA |
| GenBank Accession | BX651012 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:4587646 - go to primer design |
| BLAST e Value | 3e-61 |
| Hit Clone Code (BAC ID) | T6J4 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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