SimpleSearch - Line and FST details


Line specific information

 
Line ID 553B10
Vector Used pAC161
Line Availability available as T3 set from NASC (N453014)
Segregation Analysis 50:33:20
Confirmed for Hit At3g55720
Parent of DUPLO pair none
Parent of pair(s) 2780

Gene hit At3g55720

 
Sequence (A. th genome BLAST matches underlined) 
>74-K023213-022-553-B10-8409
GTATATTACAATAATCGGATATATTGTATATTCACAACCTCTCTTCCATTGTAGTCTTTG
AATGGCTCTCTAAGCTCTCATCAAGCCTCAACAATGAGACACGTGTTTTTCCTCTGTGAA
CGATCTGAATCCCATCCATGCTCTTATAATCTGGGATCCGTGGTGGGGGGGCTCTTATTC
ATCACGCCCCCACCCCCACATCGCACATAAGTCGAATCTTATTATAATCAAAACCTAAAA
TTTCTCCATATATTAAACATAAATAATACAAGCCGCCGATTAGAAACAACTACGAAACAA
AACCAAAGCAAAATCAGCAAAAGATATCTATAATATATATCAATCAAAACTAACTCTATG
TAAAATAA
GenBank Accession BX891577 [GenBank]
Graphic View Graphic view of gene At3g55720
Predicted Position of Insertion Chr3:20681171 - go to primer design
BLAST e Value 2e-54
Hit Clone Code (BAC ID) F1I16
Hit Gene Code At3g55720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation replication factor C subunit, putative (DUF620)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX650827 [GenBank]


Last Updated on 10.06.2021 13:37