SimpleSearch - Line and FST details


Line specific information

 
Line ID 558G02
Vector Used pAC161
Line Availability available as T3 set from NASC (N453546)
Segregation Analysis 50:29:20
Confirmed for Hit At1g53650
Parent of DUPLO pair none
Parent of pair(s) 409, 4334, 4373

Gene hit At1g53650

 
Sequence (A. th genome BLAST matches underlined) 
>15-K021715-022-558-G02-8409
ATTAATTATAGTATATAATTTCAGAGAGATATAAAACTGACTAAAAGGATCACAATTCAA
CAAGAAACAAGAGACAGAGGAAAGAAAAAGTTGCGAACTTTTCCTTCTCTCTTCAGAGGA
ATTTCGTAAAAAAGATGCAAAATTTGATGAGATTAATCGAGTTTTAATGTTTGCCCATTT
CATAAGACGAAAATGGGTAAAGGGGGGAGGGAATTTTTATCGGAAGGAACAATTATTATG
AAGAGCCGTATTAAAAAAAAGAAAAAGGTTGAACGAAAAAAATATATAAATCAATGGGAA
ACCTCCCAAAAGGGAGACGAAGGAATCCCTCCTAAAAAGGAGAAAGGGGATTCACTATTT
AAATAGGCGGCAAGGAACTGAAAAGGGACACGCCTGAAAAAGGGTAAGATGATCGGGAGA
TCGATAAGGATGGGATATGAGTATGATGTCAAAAGGAGGGAACATTAAAAAAGAGTTAAG
AGTTTTTTTTCTATAAAAAATTGAAGAGGT
GenBank Accession BX651300 [GenBank]
Graphic View Graphic view of gene At1g53650
Predicted Position of Insertion Chr1:20031269 - go to primer design
BLAST e Value 7e-57
Hit Clone Code (BAC ID) F22G10
Hit Gene Code At1g53650 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CTC-interacting domain 8
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit HG967972 [GenBank] HG967972 [GenBank] HG967971 [GenBank] BX651300 [GenBank]


Last Updated on 10.06.2021 13:37