SimpleSearch - Line and FST details
Line specific information
| Line ID | 562B05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N453873) |
| Segregation Analysis | 50:50:16 |
| Confirmed for Hit | At3g48560 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g15440
| Sequence (A. th genome BLAST matches underlined) | >34-K021664-022-562-B05-8409 ATATAGTTTCTTTATCAGAAGAACACAAGACTTTATCATACCTGAAGTCCTGGAGGAGAT ATGGGATCCTACCTATAATGAGAGTCGATGGGATCCTCCCTTATAATGAGTAACTATCTT GTGATGGATGTTGATTATATCTCAATGGAAACCCCCTAAGGGAGCCTCCCAATAGTGAGA GGGTGGGGGATCCTCCCTATAATGAGTTACTCTGATCTGTTAGCTCCCATTTGGACGTGA ATGTAGACACGCTATGGGATCCTCCCTATAGTGAGAGTGNATGGGATCCTGCCTAAAGTG AG |
| GenBank Accession | FR812336 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:5307107 - go to primer design |
| BLAST e Value | 6e-05 |
| Hit Clone Code (BAC ID) | T16N11 |
| Hit Gene Code | At1g15440 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | periodic tryptophan protein 2 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
Gene hit At3g48560
| Sequence (A. th genome BLAST matches underlined) | >34-K021689-022-562-B05-8409 AATGCCTTGTTAGATAGTGTTCCTCCTGTAGCACTCCCCGGACCAGTCCCTCCTCCTATG ATTGGTACCGATGCCTTTCCAGAGACTCCCATTGTTGAGGTAACCCCTTCCATTACCAAG CCTAACTATCTTGTGATGGATGTTGAAGATATCCCTATGGGATCCCTCCTATAGTGAGAC CTATTACTCCCCGGCCTACACTGATTTGGTACCACCCTGAACTCCCCGCTTTCGTGT |
| GenBank Accession | BX651616 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:18003001 - go to primer design |
| BLAST e Value | 1e-42 |
| Hit Clone Code (BAC ID) | T8P19 |
| Hit Gene Code | At3g48560 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | chlorsulfuron/imidazolinone resistant 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |