SimpleSearch - Line and FST details


Line specific information

 
Line ID 562G04
Vector Used pAC161
Line Availability available as T3 set from NASC (N453932)
Segregation Analysis 50:46:32
Confirmed for Hit At4g01610
Parent of DUPLO pair none
Parent of pair(s) 2824, 3232

Gene hit At4g01610

 
Sequence (A. th genome BLAST matches underlined) 
>31-K021664-022-562-G04-8409
CGGACATGAGCCATTTACAATTGAATATATCCTGCAAATTTCATACATGTCAACAACATT
CATATGAAAACAAAACTAAATCTATGGGATCCCCCCTATAATGAGTAATAAAAACTTACA
TCACCCCAGCCTCTGTTCCATTGATTTGCCATCAACTAAACACAAGAGAAAATACAAACC
AAGAACGTTATAAATTTCGGTTAATTTCGAATTCTCGATAAAAAAATCTCACGAAAATGT
ATAACATTACCCAATAATCTTCTCCTTCACTGCTATGGGATCCTCCCTATAGTGAGACNT
ATTAATCCCCCCTTTATCAACCATGTTATGCGCTTATAGACTCCAAATTTATATTGACTC
AAATCTTAAACAAAGGAAACCATTAATGATACATCTTTCTTTAACTTCCATATCAAAACA
ATCTTAGGATTGAGGTTTTATTACC
GenBank Accession BX651691 [GenBank]
Graphic View Graphic view of gene At4g01610
Predicted Position of Insertion Chr4:696805 - go to primer design
BLAST e Value 3e-87
Hit Clone Code (BAC ID) T15B16
Hit Gene Code At4g01610 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cysteine proteinases superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX572537 [GenBank] BX572537 [GenBank]


Last Updated on 10.06.2021 13:37