SimpleSearch - Line and FST details


Line specific information

 
Line ID 563A08
Vector Used pAC161
Line Availability available as T3 set from NASC (N453960)
Segregation Analysis 50:43:24
Confirmed for Hit At1g12130
Parent of DUPLO pair none
Parent of pair(s) 7578, 8661, 8666, 9292, 10966, 11337, 91912, 91921, 91928, 91933, 91943, 91944

Gene hit At1g26208

 
Sequence (A. th genome BLAST matches underlined) 
>57-K022810-022-563-A08-8409
AGCCATTTACATTGAATATATAGTTTAGGAAACTGTTTCCTGAGCTACTATAAATGCAGT
TATTATTGTTCTATGGAAACATCCCTATCTCGGGGCGAACCACCCTATAGTGAGTCCTAT
TACTCACGCGCTCTGCCCTATTTGG
GenBank Accession BX651715 [GenBank]
Graphic View Graphic view of gene At1g26208
Predicted Position of Insertion Chr1:9068836 - go to primer design
BLAST e Value 3e-16
Hit Clone Code (BAC ID) F28B23
Hit Gene Code At1g26208 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Natural antisense transcript overlaps with AT1G26210
Insertion Classification TS2TE
Confirmation Status unknown

Gene hit At1g12130

 
Sequence (A. th genome BLAST matches underlined) 
>57-K021120-022-563-A08-8409
AAGCTACAATACAAAACACCACTTTAATTTTATATATGATTACTGGGATCCTCCCTATAG
TGAGTCCTATTACTCCCCCATTTGGACGTGAATGTAGACACCCCATGGCATCCGTCCAAG
GGAGCCTCCCTATGATGAGATTACTCCATCCCCCCCATACTATACTATTTTGAATTGAAA
ACTCATTTTTGAATATGCTTTCTTTTTCCCCATATTGAACCTCTGGGACCTTGCCGAAAC
AGAAAAAAAAATAACCTACCCCCGCTTTAATTTTAATATATGATTACTGGGATCCTCCCT
ATAATGAAAGCCAT
GenBank Accession FR812347 [GenBank]
Graphic View Graphic view of gene At1g12130
Predicted Position of Insertion Chr1:4119793 - go to primer design
BLAST e Value 9e-04
Hit Clone Code (BAC ID) T28K15
Hit Gene Code At1g12130 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Flavin-binding monooxygenase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37