SimpleSearch - Line and FST details


Line specific information

 
Line ID 563F02
Vector Used pAC161
Line Availability available as T3 set from NASC (N454014)
Segregation Analysis 50:37:23
Confirmed for Hit At1g49100
Parent of DUPLO pair none
Parent of pair(s) 6715, 6718, 6737, 10737, 10747, 10748, 10755, 72902, 72938, 72971, 73002, 73033, 73061, 73090, 73120, 73121, 73122, 73123, 73125, 73126, 73128, 73130, 73131, 73132, 73133, 73134, 73135, 73136, 73137, 73139, 73140, 73141, 73142, 73143, 73144, 73145

Gene hit At1g49100

 
Sequence (A. th genome BLAST matches underlined) 
>14-K021120-022-563-F02-8409
GNAGCCATTTACAATTGAATAATCCTGCTTTGAATTGTTTATGGCCATGTTTTGAAGCGT
GTGAGAGTACTTTAACAGCAACTTGCTCTCTACCATTTACATATCCATGATAAACCATAC
CGAACCCTCCTTTCCCAAGAACACTTCTAAAGTTATTTGTCATTTCAGTAACTTCCACGT
AAGTAAACTTTTTCTTTTTTGTTATTCTTGGTGGCTCGGATGATCTTGAAGTTCTACCAT
TTTCTGCAATATAAAAATTTCATAGATTTTGTATAGTTTCTACTATGGGATCCTCCCTAT
AGTGAGACTATGGGATCCTCCCTATAGTGAGGCTATGGGATCCTCCCTATAGTGGGATAC
ACTGAAATGCCCCCTCCCATTGAAACATTTTTAAAAAGA
GenBank Accession BX651804 [GenBank]
Graphic View Graphic view of gene At1g49100
Predicted Position of Insertion Chr1:18167336 - go to primer design
BLAST e Value 3e-124
Hit Clone Code (BAC ID) F27J15
Hit Gene Code At1g49100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX651804 [GenBank]


Last Updated on 10.06.2021 13:37