SimpleSearch - Line and FST details


Line specific information

 
Line ID 567A09
Vector Used pGABI1
Line Availability available as T3 set from NASC (N454345)
Segregation Analysis 50:43:33
Confirmed for Hit At5g16980
Parent of DUPLO pair none
Parent of pair(s) 69706, 69714, 69721, 69729, 69736, 69742, 69748, 69749, 69750, 69751, 69752

Gene hit At5g16980

 
Sequence (A. th genome BLAST matches underlined) 
>65-K021149-022-567-A09-8409
AGCCATTTCGCAATTGAACTCATTTACTTATTTCTAAGTGTTTTATGCCTATAAATGTTA
GAATCCGTTTGCATAATAAAGCGGCAATACTTTTTGATTGATCTTCTCAATTGCGTTTTG
ACCAATCTAAGAGATATTCTCCGTTTTTTTCCAGGTGTTTCCCTAATGGCATTGACATAT
ACTTTGAGAATGTAGGAGGCAAAATGCTAGATGCAGTGCTTATGAACATGAACATGCACG
GGCGTATCGCTGTCTGTGGAATGATCTCACAGTATGGGATCCTCCCTATAGTGAGANCAN
TATGGGATCCTCCATATAGTGAAANNACNTTCCACACAGGGGATGCCCCGTGCATATTCA
TGTTCACAAGCAATGTACCTACCATTTTGC
GenBank Accession BX652174 [GenBank]
Graphic View Graphic view of gene At5g16980
Predicted Position of Insertion Chr5:5579710 - go to primer design
BLAST e Value 1e-126
Hit Clone Code (BAC ID) F2K13
Hit Gene Code At5g16980 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Zinc-binding dehydrogenase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T20K14

 
Sequence (A. th genome BLAST matches underlined) 
>65-K021133-022-567-A09-8409
TATCGTCCATTGTATTATTAACATGCTTAAGTAGGATTTGTATGAGGATCCTCCCTAGAG
ATGAGAAATCCTTGAATCATGCGCCTCCCGTCTTTTCCCTGTCAATGATTTAGATGATAA
TATTGATAATCCACAATTTCGTGGGTTGTCACTATTTCCTCTGTGATTGGAATCTTTTAA
TCTATAAAAAATGACAATTGTTAAACATAAATGGTTACAAACAGCTTTGTTGTATGGGAT
CCTCCCTATAGTGAG
GenBank Accession BX652173 [GenBank]
Graphic View Graphic view of sequence BX652173 of line 567A09
Predicted Position of Insertion Chr5:5077769 - go to primer design
BLAST e Value 5e-76
Hit Clone Code (BAC ID) T20K14
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37