SimpleSearch - Line and FST details
Line specific information
| Line ID | 567C12 |
| Vector Used | pGABI1 |
| Line Availability | available as T3 set from NASC (N454372) |
| Segregation Analysis | 50:39:24 |
| Confirmed for Hit | At5g11660 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 89719 |
Gene hit F12M16
| Sequence (A. th genome BLAST matches underlined) | >91-K021133-022-567-C12-8409 ACTTGCTCTGCTGTTGACTTCCTTCATTTAGACCAACAAGAGTGTCTTCATCTACTAATC TAATGTCCTATTCTTTTTTACTTATTAAAGACTACATCACACTCAAGTTCGGTGGATCTC CTACACTCTTGTTTAAAGTAGACAGTTATTTGACGGTATGGGATCCTCCCTATAGTGAGA CGTTCCTGTTTTGGAAGCCTCCTTAAAATGTGTAATGCGAATAGCGGTAAGGCATCCTCC CTATAGTGAGANTCAGGTTTTGCAACCAAACCCGATTTAACTAAGAGCGTTTAATAAAAG GGGGGAGATCTGTATTTACGTGAGACTTTAGGCAGGATAGAAAAAAGCACCGCGCGTTAA GAAGACAGACATGACCGGTGCGGGAGGCGGCAAAGAAATAGCTTAAGAACAGAAAGTAAT GATGAGTCAAAGATAACAG |
| GenBank Accession | BX652208 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:19849147 - go to primer design |
| BLAST e Value | 8e-75 |
| Hit Clone Code (BAC ID) | F12M16 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At5g11660
| Sequence (A. th genome BLAST matches underlined) | >91-K021149-022-567-C12-8409 TTAATTACTTGAGTTACAAATGTGTATATTTGGAAAATACGTATGATATATTTTTTTTGG AAATTTGAAGTATGCTGGAGTTAAATCACAAGGTGATGGTCCTTATCATGGGTTGGCAGC TTATATGAGTGTGCATGATTTGAATATTAGTAGGGACCAAACTTCATATGCTAGCATTTT TGTTGGTAGTGGAGACAACAAGAAAATTAATTTTATTCAAACCGGTTGGATGGTAAATTT TATGTTGATGTTATTAAATTTATATATATATATATATATTTATATATATTGGTTTTAAAA ATAGGTTACATTACTATGACTTACAGGTGAATCCAAGTTTATTTGGTGATGGACGTATGG GATCCTCCCTATAGTGAGAGAG |
| GenBank Accession | BX652209 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:3749087 - go to primer design |
| BLAST e Value | 2e-128 |
| Hit Clone Code (BAC ID) | T22P22 |
| Hit Gene Code | At5g11660 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NEP-interacting protein, putative (DUF239) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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