SimpleSearch - Line and FST details


Line specific information

 
Line ID 570A06
Vector Used pAC161
Line Availability available as T3 set from NASC (N454630)
Segregation Analysis 50:49:37
Confirmed for Hit At1g52600
Parent of DUPLO pair 397
Parent of pair(s) none

Gene hit F19C14

 
Sequence (A. th genome BLAST matches underlined) 
>41-K021195-022-570-A06-8409
TTGTCTTATGGGATCATCTCTATTCTGAGAGCGTGTATCTGAGTCTTTTGCTTTCTTTCT
CCGGTACCGCTATGGGATCCTCCCTATAGTGAGACTAATGAATCCGTCATTTCGAGTGGA
TAGAAGAATGTCTTAGGAGCCGAATCACCGGTAGGGGAAGAAAAATGAAAGTTGGTTTGG
ATAGGACGTCTTTTTTTCAACCGTCCTATTTACAGGCCAAAGTGATAAACAAATTATTCT
AATTCGGAAATCTTTATTTCGACGTGTCTACTTTCAAGTCCAAATGGGGGCTCAAATGAG
AAAGTTCCTAATCGAAGCCATGATCTCACATTTCCAAAAAACGCATTTCTTCTTCAGATT
GTTCTGAGATTATGCAAAAATATACATTCAGAGAGGGAAATACTGAAAGTTTGAGCTACC
AATTCAGTGTANCCCAATATAGGGAAGATCCCTTAACTTTACAAAACTAATGAAGAAATA
TAATTATAGAAAAAAT
GenBank Accession BX652486 [GenBank]
Graphic View Graphic view of sequence BX652486 of line 570A06
Predicted Position of Insertion Chr1:21681452 - go to primer design
BLAST e Value 6e-08
Hit Clone Code (BAC ID) F19C14
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g52600

 
Sequence (A. th genome BLAST matches underlined) 
>41-K021262-022-570-A06-8409
TGGGATCCTCCCTATAGTGAGACTTGTGTCTCATCTGATTGATCTCTTGCTCTCTGTGTT
GAATTCTGGTACGGATGATTGTCACATCTGCTTTGATCATATGGAAAGCTTTGATGTGTG
TCACTGGAAGCGAATCTCCGGTGGTGGTTGTTCTCTCCGCAATCTTGTAACCCGGATTTC
TTAATTTCAATGTACTTACGTTCTCGGCATACTGAAGATTTTAAAGACCCCCTACTCTAT
CTTTGCCTAGAATTCCCCTACCCCAAATCCCTTTTTCATCTTCCAATTGTTCTTAAATTA
AGCAAAAATAGACCCTCGTATACATAAATACTGACAGTTTCAGCTACACTATTCAATGTA
GCCCA
GenBank Accession BX652487 [GenBank]
Graphic View Graphic view of gene At1g52600
Predicted Position of Insertion Chr1:19591344 - go to primer design
BLAST e Value 6e-54
Hit Clone Code (BAC ID) F6D8
Hit Gene Code At1g52600 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Peptidase S24/S26A/S26B/S26C family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37