SimpleSearch - Line and FST details


Line specific information

 
Line ID 570E03
Vector Used pAC161
Line Availability available as T3 set from NASC (N454675)
Segregation Analysis 50:44:21
Confirmed for Hit At2g20840
Parent of DUPLO pair none
Parent of pair(s) 2893, 3133, 37471, 81918

Gene hit At2g20840

 
Sequence (A. th genome BLAST matches underlined) 
>21-K021195-022-570-E03-8409
ATTGAATAATCCTGCTTCATTGCTCGTCTTGTGGCCTCCTGCTTCATCTCTGCTGCTTTC
CCGCTCCCCCTGAAGTACATGTACACTTGCTGTTCCCACACACACACACAACAACAACAA
CAACTTGTTAACCACTTCTTCCTTTTTAACTTATCTACATGAATAAATGATTCAGCAAAG
GAGGGAACCTGAATAACCCAGATGCTGACGAGTGACTCCAGACAGAAGAACCCAAACCCA
ATGAAGTAAAATATCTGCCACCACCTCACCAAAAGTTAGCCTTACTCAAAGTCCACAACT
GTTTAAGTTATTCGCTACCTAAGCTTTCAACTTACCCCGACCAAGATATTCCCACTCAAT
ACGTCGATCGCCGGCAATATTCCTCTGCATAACACAACAACATATGATGATTCCACCTCT
TTCCTTTTGTGTGATTTAAAAACTAATTTGTTACTTACGTCAGCGATTTTCCCTTGAAGA
TAATTGGAGGAGCCACCGCCGCAAACACACAAAACGCTATGTGAAACTGCAATCAT
GenBank Accession BX652544 [GenBank]
Graphic View Graphic view of gene At2g20840
Predicted Position of Insertion Chr2:8971949 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F5H14
Hit Gene Code At2g20840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Secretory carrier membrane protein (SCAMP) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37