SimpleSearch - Line and FST details


Line specific information

 
Line ID 570E08
Vector Used pAC161
Line Availability available as T3 set from NASC (N454680)
Segregation Analysis 50:47:44
Confirmed for Hit At1g19340 At3g03940
Parent of DUPLO pair none
Parent of pair(s) 64471, 95199, 95200

Gene hit At1g19340

 
Sequence (A. th genome BLAST matches underlined) 
>61-K021262-022-570-E08-8409
AGCCATTTACATGTATACACAACATGGGCTGTTCAAACAGAAGTTCCTTTCTCAGATTAT
TCAAGTGACAAAAAAATGAATTGACTTACTTCGGTAAAATGGTAGCCTATGGGATCCTCC
CTATAGTGAGACTATGGGATCCTCCCTATAGTGGGCTACACTGAATTGGTAGCTCTAGGG
GGTCCTTCTTATTTTGAAAAGAGAGGATTTTCCCTTTTGAGGAGACCACTTTTTACGTGC
CGTCGTATTTTGGGGCGAAAGCAATCAACGAATTATTCTTGTTCGGAACTCTTTATTTCG
ACGTGTCTACATTCACGTCCAAATGGGGGCTTANATGATAAACTTCTCGAACGATGCCTT
GATTTCGCCCTTCCCAGATACCCATTTCATCTTCAGATTGGTCTGAGATTATGCAAATAT
ATACACTCTTATACATAAATACTGACTGTTTGAGCTACCTATTCAGTGTAGCCCA
GenBank Accession BX652549 [GenBank]
Graphic View Graphic view of gene At1g19340
Predicted Position of Insertion Chr1:6686414 - go to primer design
BLAST e Value 5e-33
Hit Clone Code (BAC ID) F18O14
Hit Gene Code At1g19340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Methyltransferase MT-A70 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g03940

 
Sequence (A. th genome BLAST matches underlined) 
>61-K021195-022-570-E08-8409
AAGCCATTTACAAGTGAATATATCCTGGCCGATACATATTAAGTACCTTTCTAATATTAC
TCCAGTGATAAAATTGTGATTCGACTTATATCTTTCAAATGGGAATCCTCGGTAAACCAC
CTGCATGAACACCTGTTGCAACCATTGATGTTATCCTGTATCCACTTTCCCACCTTCGAT
GTATTCCTTCACTTGGGTACAAGAAGTCAAGCTCCACCACCTATAATATACACCACATAA
ACCTCGTTAATACATTATAGTGCTCAAAAAGGAAACAAAGAAAAGTTGAAATGCCTCAGG
TAAAGAGATCGGAACCTGTTCAGAGTAGCCTGAGTTCCTGGACATTACTACACCCCAACG
ACTCCCAGCGGTGGTCATGGATGTTACATGAAAACCTTCTTTCCACTTTTTATTTATCCA
CTTGAATGGAAATGAGTCGCTGACTTTGTAAGATTGCTGGGTATAAGGAGTTCCTATCGC
ATTACATGAAGTGGAATAAGTAAAACGGCTTTCATGCTTTATGAATCAATAAGTTCATTG
GCAAA
GenBank Accession BX652548 [GenBank]
Graphic View Graphic view of gene At3g03940
Predicted Position of Insertion Chr3:1014584 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F20H23
Hit Gene Code At3g03940 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37