SimpleSearch - Line and FST details


Line specific information

 
Line ID 574C02
Vector Used pAC161
Line Availability available as T3 set from NASC (N455034)
Segregation Analysis 50:35:27
Confirmed for Hit At5g59650
Parent of DUPLO pair none
Parent of pair(s) 6708, 6717, 6727, 6732, 6744, 10740, 10754, 72900, 72935, 72968, 73001, 73031, 73032, 73033, 73034, 73035, 73036, 73038, 73039, 73041, 73042, 73043, 73045, 73046, 73047, 73048, 73049, 73050, 73051, 73053, 73054, 73055, 73056, 73057, 73058, 73059

Gene hit At5g59650

 
Sequence (A. th genome BLAST matches underlined) 
>11-K021121-022-574-C02-8409
GNAGCCATTTACATTGAATATATCCTGTCCCTCTCTCATCAGTGTACTCTTGTCTTTTTC
ATTTTATATTTATTTTCCCGTCGAATAATTTATATGCTTAAAACACTTAGAAAATTCTAT
GTTTTTTAATATGTTTTAATTTTAGTTTTAGTTTAGGCAGCTTGATCAGTTTATTGTTTT
CTAGGGGATCCACCCAATCGCGAGAGACAGTCCAAGCCTCTGGCAACATGGCAAGATGTC
CTGAGTCAGTGAAACGAATGAGTAAATGTGTTTTCTATTGCAACTTTACAATTACAAATT
TGATTTGTCCCAAGAATGTCAGAATATATGCAACTTGTATTTAGAAAAAATAATATGCAA
CTTCTGTGTTTTTAAGAGAATATGTCAATAGAGGGTTTTACAGTCACCACTCTTTTAACG
CATTAAAAAATGTTCACACAGAGAGAAAGCAAGAGATTTGACTTTCTATGGGATCCTCCC
TATAGTGAGA
GenBank Accession BX652928 [GenBank]
Graphic View Graphic view of gene At5g59650
Predicted Position of Insertion Chr5:24031446 - go to primer design
BLAST e Value 2e-146
Hit Clone Code (BAC ID) MTH12
Hit Gene Code At5g59650 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37