SimpleSearch - Line and FST details


Line specific information

 
Line ID 575G07
Vector Used pAC161
Line Availability available as T3 set from NASC (N455183)
Segregation Analysis 50:41:29
Confirmed for Hit At3g58570
Parent of DUPLO pair none
Parent of pair(s) 2973, 9626

Gene hit At1g65900

 
Sequence (A. th genome BLAST matches underlined) 
>55-K021190-022-575-G07-8409
ACCATTTACATTGAAATGTAATTGCCGATTCATGTACATTTCACCTGTACAATTGACTGT
ACTTCCAGGATAAAGTCTTATGTGATTCCACTTCTAAATTACTCATTAGACACTCAATCT
TCTCAAGGTATGTTCTGTTTTTTTCTCCCCTGTTTCATTCCTCTGTTTAACAAAATTCTG
TTGTTTTAGATCTCTATGTTTTCTCTTATGCAGGAAGTGTTCCGGTTTCTTTCTTTAAGG
TAAACACTCCTTTCTATGGGATCCTCCCTATAGTGAGACATAATAAACAGTAAATACAAA
CTGTATTTCCGCTCAAAAAAAGATATGTACTCAGCGTTATT
GenBank Accession BX653078 [GenBank]
Graphic View Graphic view of gene At1g65900
Predicted Position of Insertion Chr1:24518013 - go to primer design
BLAST e Value 7e-94
Hit Clone Code (BAC ID) F12P19
Hit Gene Code At1g65900 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation plant/protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At3g58570

 
Sequence (A. th genome BLAST matches underlined) 
>55-K021164-022-575-G07-8409
AATATTTCAACCTGCCAAATTGACTGTTGCTTCCTTGAAAAGTCGTATGAGATACCACTT
CTAAGTTACTCCTTCAACACTCAATGCTTCTCAAAGTATGTACAGTTCTTTCCTCCCCTT
TTTCATACCTCCGAAAACTCAAACTTTGCTGCTTTTAATCAACAAGCTCTCACCTACGAC
AAACATCTACCCTTATTTCCCTCTTACTCCCAAGTATATTAAATTTCATTGAAATGAATC
GCTATCTTGTTCTTTCATATCACTAACATAAGAACCGCTATATTCTTCCTCACTCCATGC
AAATATCAGATCATTTACACAAGTTAAGGATAAGTGCTCGGTCAGATTTATCCAAGTTGA
TTTAAAAGATAATAATTCTCAGAACAATTGTACTGGAGACCCAAAAGACCCAAATAACGT
AGTCCCATAACAATGAAGACACTAACAGAGCAAGAAAGACTGAAGATAGAGATAGCTGAG
AATCTTCTCCGGTAAGGAGAA
GenBank Accession BX653077 [GenBank]
Graphic View Graphic view of gene At3g58570
Predicted Position of Insertion Chr3:21659127 - go to primer design
BLAST e Value 2e-177
Hit Clone Code (BAC ID) F14P22
Hit Gene Code At3g58570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-loop containing nucleoside triphosphate hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37