SimpleSearch - Line and FST details


Line specific information

 
Line ID 575H12
Vector Used pAC161
Line Availability available as T3 set from NASC (N455200)
Segregation Analysis 50:36:34
Confirmed for Hit At5g37500
Parent of DUPLO pair 2779
Parent of pair(s) none

Gene hit At5g37500

 
Sequence (A. th genome BLAST matches underlined) 
>96-K021164-022-575-H12-8409
AGCCATTTACATTGAAAGATAATATGACCATCGGTTTTTGGGATCAATACGTAGAAAATA
CTTTTCTTTATAATCATTATGACCATAATATTCTTTAAAATAAATAAGTATTTTCGCCTA
TAAATACGATTGAAAGAGAAAAAAGAAAGAACCTGTTTTTGGGATGAATGATGTATTTAT
AATCATTATGACCATCGGTTTCAATTCTCCGATGCTCTGATGAATCAAGCCACCGAAACG
TCTCGGCTAAACTGAGTTTTCCTCTTCTTGATGAAACGTCGTCGTTTGATTCCTCTTCTT
CATGATCTATTATCTCTTGCCGTCTCCGGAGACGTCCCATGTTTTCAAGAATCGGTTAAA
TGAAATCTCCGGCGATCTCTTCGACACAAAGATCTATGGGATCCTCCCTATAGTGAGACT
AATTAATCCTCCCTTTAGTGGGAAAAGTTGAATCCCCAACTCCAGTTGTAAAAAGGATGG
TATATT
GenBank Accession BX653092 [GenBank]
Graphic View Graphic view of gene At5g37500
Predicted Position of Insertion Chr5:14894569 - go to primer design
BLAST e Value 3e-148
Hit Clone Code (BAC ID) MPA22
Hit Gene Code At5g37500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation gated outwardly-rectifying K channel
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX653092 [GenBank]


Last Updated on 10.06.2021 13:37