SimpleSearch - Line and FST details


Line specific information

 
Line ID 578G09
Vector Used pAC161
Line Availability available as T3 set from NASC (N455473)
Segregation Analysis 50:29:29
Confirmed for Hit At1g29370
Parent of DUPLO pair none
Parent of pair(s) 11815
Note

Gene hit At1g29350

 
Sequence (A. th genome BLAST matches underlined) 
>71-K021293-022-578-G09-8409
NNNTTGCGTGCATATCCGGACAGNAAGCCATTTACATTGAATATATCCTGCGATCAGCAG
CAGTTGATTGCATTCCACTTGCCTTAAACCATGTACTGGACTCCCAGATTGTGACGTCAA
TTCGGACATAACTTCCCTACACTGCAGTGCGTGAAACAATAACGTGCCTGCCCACGGTCT
ACTATCTTCAAAAACACAACTAGGAATCCGTCCTCAGCTATAACATCCTTTCATTCTTAC
TCCTCAACACGGGGAATGGATCTGAACAAGGAAAAAACAAGTATCAATATCATTAATAAT
AGAACAAAGACAAGCCTTGAATCAAGAACTAAGAAAGCAAACCATTAACAACATCTTTCT
TCTCTATAAAACCGAACCAGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX653319 [GenBank]
Graphic View Graphic view of gene At1g29350
Predicted Position of Insertion Chr1:10272848 - go to primer design
BLAST e Value 1e-64
Hit Clone Code (BAC ID) F15D2
Hit Gene Code At1g29350 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA polymerase II degradation factor-like protein (DUF1296)
Insertion Classification CDSi
Confirmation Status failed

Gene hit At1g29370

 
Sequence (A. th genome BLAST matches underlined) 
>71-K021293-022-578-G09-8409
NNNTTGCGTGCATATCCGGACAGNAAGCCATTTACATTGAATATATCCTGCGATCAGCAG
CAGTTGATTGCATTCCACTTGCCTTAAACCATGTACTGGACTCCCAGATTGTGACGTCAA
TTCGGACATAACTTCCCTACACTGCAGTGCGTGAAACAATAACGTGCCTGCCCACGGTCT
ACTATCTTCAAAAACACAACTAGGAATCCGTCCTCAGCTATAACATCCTTTCATTCTTAC
TCCTCAACACGGGGAATGGATCTGAACAAGGAAAAAACAAGTATCAATATCATTAATAAT
AGAACAAAGACAAGCCTTGAATCAAGAACTAAGAAAGCAAACCATTAACAACATCTTTCT
TCTCTATAAAACCGAACCAGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX653319 [GenBank]
Graphic View Graphic view of gene At1g29370
Predicted Position of Insertion Chr1:10282259 - go to primer design
BLAST e Value 1e-64
Hit Clone Code (BAC ID) F15D2
Hit Gene Code At1g29370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA polymerase II degradation factor-like protein (DUF1296)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37