SimpleSearch - Line and FST details


Line specific information

 
Line ID 579D05
Vector Used pGABI1
Line Availability available as T3 set from NASC (N455529)
Segregation Analysis 50:11:11
Confirmed for Hit At4g23470
Parent of DUPLO pair none
Parent of pair(s) 2366, 97305

Gene hit At4g23470

 
Sequence (A. th genome BLAST matches underlined) 
>36-K021325-022-579-D05-8409
GNAGCCATTTACATTGAATATATCCTGACATTTGCTGAGCCGGAGGCACTGCCATTGGCT
GTGGCCCGAACTTACCGTCCCTCTTGTCCATTTCCATCTTGTGTTGTGTCTACAAAAGTA
TTATAGATATTACCGTAAGTGTAGGATTTAAGTAAGGAGAGATTGGAATGGGTTGATATG
ATATCATCACTGCTCGTATGGGATCCTCCCTATACTGAGATGTTTTCCTCTTCCGGATCT
TCACGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX653383 [GenBank]
Graphic View Graphic view of gene At4g23470
Predicted Position of Insertion Chr4:12250893 - go to primer design
BLAST e Value 3e-93
Hit Clone Code (BAC ID) F16G20
Hit Gene Code At4g23470 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation PLAC8 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g55990

 
Sequence (A. th genome BLAST matches underlined) 
>36-K021289-022-579-D05-8409
GNAGCCATTTACAATTGAATAATCCTGAAAATGATCCATCGAGTTTATGTATGTATTATT
TTTTTCTTTTTTATTTTCGTTTACAAGTTTCAATTCTTCTCTATATATTAAAAAAACAAA
CAGATGCAACCTTGGAGAAGAAAATTTCCATTGTTCGAAACAGGAGTTACAATGAAACAG
AGGAAGAACAGTAATCTCTCAATCTTCGTCGTAGTCTTCTCTGTTTTCCTCTTCGGGATC
TTCATGTATGGGATCCTCCCTATAGTGAGANNGNANGGGATCCTCCCTAT
GenBank Accession BX653382 [GenBank]
Graphic View Graphic view of gene At3g55990
Predicted Position of Insertion Chr3:20780323 - go to primer design
BLAST e Value 1e-79
Hit Clone Code (BAC ID) F27K19
Hit Gene Code At3g55990 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation trichome birefringence-like protein (DUF828)
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37