SimpleSearch - Line and FST details


Line specific information

 
Line ID 579G01
Vector Used pGABI1
Line Availability available as T3 set from NASC (N455561)
Segregation Analysis 50:27:15
Confirmed for Hit At3g49790
Parent of DUPLO pair none
Parent of pair(s) 7024

Gene hit At3g49790

 
Sequence (A. th genome BLAST matches underlined) 
>07-K021289-022-579-G01-8409
TATCCGGAATGAGCCATTTACATTGATTCATATGAAGAAGTGATGTTTTAACTCTCACAA
ATCTCCTTGTCTCATTTCCTCTCTCTCTCACTTTCTCCACATAACTCTCCACTTTACCAT
TTGCTCTCTCAATCAACACTTCTAACAACGATCTAACCGTCTCAAACGTTACCCGCCCGG
TTAAATCCACCACATATTTCCGGTTACTCGGTATGGGATCCTCCCTATAGTGAGACCNNA
AGGGATCCCCCCCAAAGGGAGAAAAATTGCTGTTTGTAATAGGATATTTTCTACTACAAC
ACATCATGGTCTTCTCGGAAATTCGAAGCCTTAATGCCCGGAATGATACCCCCGATTATC
ATAAGAGGAACCGTGCAATGAATTGTTAGACAATGAATTGTATGAATGGCATGCTCACTA
TTGTGAGGAGTGTGCTGCAGCAAATCTTGTTAGAGAATATTCCAAATCTTTATATGGAAT
CCTCCAAAAAATGA
GenBank Accession BX653416 [GenBank]
Graphic View Graphic view of gene At3g49790
Predicted Position of Insertion Chr3:18468378 - go to primer design
BLAST e Value 1e-39
Hit Clone Code (BAC ID) T16K5
Hit Gene Code At3g49790 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Carbohydrate-binding protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX653417 [GenBank]


Last Updated on 10.06.2021 13:37