SimpleSearch - Line and FST details


Line specific information

 
Line ID 583B01
Vector Used pAC161
Line Availability available as T3 set from NASC (N455885)
Segregation Analysis 50:38:31
Confirmed for Hit At1g33800 At1g33810
Parent of DUPLO pair none
Parent of pair(s) 4303, 4425, 4547

Gene hit At1g33800

 
Sequence (A. th genome BLAST matches underlined) 
>02-K114691-0022-583-B01-8409
TCACAAAGGATTCTGATGGTATGTTCGAAGATGCTAGTCCCTGTACTGTTCATTTTACTA
TAACGCTGCGGACATCGACCTTTTTGAATTGAAAAAAAATTGGTAATTACTCTTTCTTTT
TCTCCCTATTGACCAACATACTCATTGCTGATCCATGTAGATTTCCCGGACATGAAGCCA
TTTACGATTGTATATATCCTGATGGTATGTCGAAGATGATTCCGATAAGTTTAGCATCTC
AAATCTTAGGGTGGCGAAGGATTCATGATGGTATGTCTAAGATGCTCGTCCCTAACCTGC
CCAACAACATAAANNTNNNNNNNNNNTGNNNNNNGCCNNNNACNNNGNNGTTNCNNGGAG
ACTTCTTGTCCNGGACTCTCTTTGAGACGGAGACTTCATCAAATGTTTGTTGTGCAGTGA
CGTTACTA
GenBank Accession HE664748 [GenBank]
Graphic View Graphic view of gene At1g33800
Predicted Position of Insertion Chr1:12262192 - go to primer design
BLAST e Value 2e-22
Hit Clone Code (BAC ID) F14M2
Hit Gene Code At1g33800 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit HE664748 [GenBank]

Gene hit At1g33810

 
Sequence (A. th genome BLAST matches underlined) 
>02-K021751-022-583-B01-8409
ATTCTGATGGTATGTCGAAGATGATTCCGATAAGTTTAGCAACGCAAAGCTTAAAGTCAC
AAAGGATTCTGATGGTATGTCGAAGATGCACGTCCCTATGGGATCCTCCCTATAGTGAGN
N
GenBank Accession BX654745 [GenBank]
Graphic View Graphic view of gene At1g33810
Predicted Position of Insertion Chr1:12265134 - go to primer design
BLAST e Value 1e-39
Hit Clone Code (BAC ID) F14M2
Hit Gene Code At1g33810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation zinc finger/BTB domain protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit HE664747 [GenBank]


Last Updated on 10.06.2021 13:37