SimpleSearch - Line and FST details


Line specific information

 
Line ID 585A06
Vector Used pAC161
Line Availability available as T3 set from NASC (N456070)
Segregation Analysis 50:44:39
Confirmed for Hit At1g35170
Parent of DUPLO pair none
Parent of pair(s) 84904, 84905

Gene hit T26I12

 
Sequence (A. th genome BLAST matches underlined) 
>41-K021757-022-585-A06-8409
ATGAAGCCATTTACAATTGAATATATCTCCTATCATATTATGTGATCATCCATATAGTTG
AGACACCTAAAGTATTCATAATCCAATACGTAGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX654923 [GenBank]
Graphic View Graphic view of sequence BX654923 of line 585A06
Predicted Position of Insertion Chr3:20478070 - go to primer design
BLAST e Value 2e-11
Hit Clone Code (BAC ID) T26I12
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g35170

 
Sequence (A. th genome BLAST matches underlined) 
>41-K021753-022-585-A06-8409
GTATTACATTTTTCCCCGGCAAGAGGATTAGCCGAGCCAGGTATGTAGGAGAATAATAAC
CCGATACAACGCCCCTGAAATGTTATATCCCCACTGAAATTTGTGATCCTGAAAAATATT
TTAGCATCTTTTCCCAAACAAAATCTTCCTTTCCGTTTTGAAAGCTTCATATTTTTATAA
GAGCAGGAACTTTTGATGAATCCCTAAAAAAAATATCCTATGGAATCCTTCCAATATTCA
GTTTTTTAAAAAAATAAAAAATTTTTGAAAAATTATTATAAATATA
GenBank Accession BX654922 [GenBank]
Graphic View Graphic view of gene At1g35170
Predicted Position of Insertion Chr1:12870816 - go to primer design
BLAST e Value 1e-33
Hit Clone Code (BAC ID) T32G9
Hit Gene Code At1g35170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37