SimpleSearch - Line and FST details
Line specific information
| Line ID | 590A04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N456548) |
| Segregation Analysis | 50:48:39 |
| Confirmed for Hit | At2g22400 |
| Parent of DUPLO pair | 1764 |
| Parent of pair(s) | none |
Gene hit At2g22400
| Sequence (A. th genome BLAST matches underlined) | >25-K021768-022-590-A04-8409 TTCCTTTACGAGCAATGGTGGAAGAGTACAGTGCATGGTGACGGTGTTCGGCATGCTGAA TCTCACCGAGGACTCCTTCTTCGATGAGAGCCGGCGGCTATGGGATCCTCCTTATATTGA GAGCATATTTTCACTTATTCCTTTCTCAGAAGCTCGTGGATTTGACCCTGCCGACAATTA GGATCACTGTGGCGCGATTTGATTAGACACTTTCAAATCGAAGCCTTGTATTCTCCGTTC TAGTAAAACGCTTTCGCCTTCAGATTGTTCTGCGATTTCGCAAATCTTTATTCCCATATG TCTAAATACAGACCGTTTGGGCTACCTATTCGATGTATCCCACTATCGATGCGATGATTT CGCCTTTCCCANTTCCTCTTTTCATCTTCGCATTGGTCTGANATTATGCTAAAATATACA TTCCTATT |
| GenBank Accession | BX655602 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:9506917 - go to primer design |
| BLAST e Value | 2e-10 |
| Hit Clone Code (BAC ID) | F14M13 |
| Hit Gene Code | At2g22400 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T5C23
| Sequence (A. th genome BLAST matches underlined) | >25-K021773-022-590-A04-8409 TGGGATCCTCCCTATAGTGAGACGCTATTACATCAGTGGTTCATAATAAATTTGCCTTCT ACACTAACATTAGTGTCTACCTAACATCATACGAAACTACTTGAATCATTGATTTTCTAA AAAATAATCATCGTAGTAACCATTGGTATATTCAAAACTTTTTCCAAAAATTTCTTCAAC GATGATACTCGTCTTGAAAAATCATGTGACATCTATTGGCACACATACATCCTATGGGAT CCTCCCTATAGTGAGATTTCCCCTTTCCAAGATACCCGTTTCCATCTTGAGACTACTCTG ATATTAAGCGGACCCTCTCAATTATAAAAACTATGGGATCCTCCCTATAGTGAGAATAAA AGATCACCCCTCTAATGAGAATATCAAAACATTAGGATTATTCTTCATATTCGGAAATCT TTATTTCCCCCTGTCTACAT |
| GenBank Accession | BX655603 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:7027873 - go to primer design |
| BLAST e Value | 1e-64 |
| Hit Clone Code (BAC ID) | T5C23 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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