SimpleSearch - Line and FST details


Line specific information

 
Line ID 594D07
Vector Used pAC161
Line Availability available as T3 set from NASC (N456971)
Segregation Analysis 50:43:41
Confirmed for Hit At1g08590
Parent of DUPLO pair none
Parent of pair(s) 2836

Gene hit F15J1

 
Sequence (A. th genome BLAST matches underlined) 
>52-K021859-022-594-D07-8409
GNAGCCATTTACATTGAATATATCCTTACACAACTTTCTTTGTTTTTTACTCACATAAAG
ATCGCTACAATTGCTATGTTCTAAAATCGCTATACATCTTTCTGTCAACGGCCTAATAGG
CAAATACTTGCACCATTTACAAGCAAGTAAGTTTATATCAGTGACATATAAGCAATATAT
GATATAGTCCATGCGATTCCAGCTAAGCACATATAACTAATTCATACTTTAGTGGAACTA
TGGGATCCTCCCTATAGTGAGAACTTGAAGGCCAACAATATCTCTTGTTCGGAGTTTTGA
AATGTTTCANAAGAAACAAAAGGGAAAAGAGCGGAACACGTGTGCTATAATATGAAGAAG
ACCAATTACACTCCGTCTTATCTCATCGACTACATCAATAAATGGATTAGTCTACTTCGG
AAAATCTGAGTACGACGTGACAACATACGCAT
GenBank Accession BX654049 [GenBank]
Graphic View Graphic view of sequence BX654049 of line 594D07
Predicted Position of Insertion Chr4:16854945 - go to primer design
BLAST e Value 8e-66
Hit Clone Code (BAC ID) F15J1
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g08590

 
Sequence (A. th genome BLAST matches underlined) 
>52-K023193-022-594-D07-8409
TATATACTCCTTACTCTTTCTTTTTCTTTTTCTTCCTAAAGTCTCTTTCTAATCTCACGT
CTTTGAAGGTCATTGATGCGAGNNGGGACNGNNNCCCCGGAACCGAACGAAATGGAAGCA
CATTTCGATAAAGCGACAAGTTGCGATCCGGCGTATTTATAGGCGAAAGC
GenBank Accession FR812805 [GenBank]
Graphic View Graphic view of gene At1g08590
Predicted Position of Insertion Chr1:2719194 - go to primer design
BLAST e Value 5e-12
Hit Clone Code (BAC ID) F22O13
Hit Gene Code At1g08590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich receptor-like protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX891987 [GenBank] FR812805 [GenBank]


Last Updated on 10.06.2021 13:37