SimpleSearch - Line and FST details


Line specific information

 
Line ID 594E02
Vector Used pAC161
Line Availability available as T3 set from NASC (N456978)
Segregation Analysis 50:46:38
Confirmed for Hit At5g49430
Parent of DUPLO pair 12045
Parent of pair(s) none

Gene hit At5g49430

 
Sequence (A. th genome BLAST matches underlined) 
>13-K021859-022-594-E02-8409
GAACCATAGTTAGAGAGTTCACACAAAAGAACCCAGGTATGTGATCCTAATGAATATAAT
ATCTCATGGTGTTAGATCTATGGGATCCTCCCTATAGAGAGAGAAACNNNTGCGGGTATG
GAAAAAATCATTTNACCTAGTCATTTCATAGAAGCAATGGGACTTAAAAAAAACAAAGAA
GCCCATAGTAAACCATAAAAGGAGGCGTTGATAGGAGTATAGAAGAGGGAAGAGAGGATG
AGCGGAGAAAACGCCAGGCAAGGAAAACCGATTAAGAACCGACGAGAACGGGGGAAAAAT
AAAAAAATCGAGACTGAGGGCCCGCGGCAGAGAGAACCAACAAAAAAAAAAAACAGAAGA
CGACAGACAAGCAGAACAAATCTAAGAAGAAGAAACGGAAGAAACA
GenBank Accession BX654054 [GenBank]
Graphic View Graphic view of gene At5g49430
Predicted Position of Insertion Chr5:20038012 - go to primer design
BLAST e Value 5e-24
Hit Clone Code (BAC ID) K7J8
Hit Gene Code At5g49430 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37