SimpleSearch - Line and FST details


Line specific information

 
Line ID 596C01
Vector Used pAC161
Line Availability available as T3 set from NASC (N457145)
Segregation Analysis 50:49:46
Confirmed for Hit At5g11150
Parent of DUPLO pair none
Parent of pair(s) 4982, 5008, 5039, 5089, 10164, 83635

Gene hit At5g11150

 
Sequence (A. th genome BLAST matches underlined) 
>03-K025557-022-596-C01-8409
NNTTTCGTAGGTATTCCGGACATGAGCCTTTACATTGAATATATCCTGAAACCCAGGGGA
TCCGCGCAATATATGAGTACTTTCACAATAACCGCTGTTCGATGCTTGCAGAAATTAGAT
TTATAATCAGAGATCATAACGGCATACATAATCTAAGTAGCATTTATAAGAACTAAGGTG
ATCGATCGAACACTGAATTGAATTATATCAGAATGAACTTGCCGCCTTATCGGTGCTTTT
TTAAAAAGTCGACGAAATACCTATGGGATCCTCCCTATAGTGAGACGAATGACTCAAATG
AATAGGTCGGCCATATGTTTTCATGCACCACTGATGACCATACGCCAACCACGCTAACGG
AAGATTCCCTGCCGCAACATCAGAGCAAAATCATAAGTGACATAAACCTAACATCACCAA
ATTGCTCCCAGAAAATTATCAGCATCTTTCTATTGAAACAACAATCAAATCCCCCAGAAT
TGATATAAGATCTCAGCAGAAATCGAAGACACTCAAATACAAGAGCCAA
GenBank Accession CR356350 [GenBank]
Graphic View Graphic view of gene At5g11150
Predicted Position of Insertion Chr5:3547113 - go to primer design
BLAST e Value 1e-95
Hit Clone Code (BAC ID) F2I11
Hit Gene Code At5g11150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation vesicle-associated membrane protein 713
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR356350 [GenBank]


Last Updated on 10.06.2021 13:37