SimpleSearch - Line and FST details


Line specific information

 
Line ID 596G04
Vector Used pAC161
Line Availability available as T3 set from NASC (N457196)
Segregation Analysis 50:48:35
Confirmed for Hit At1g78090
Parent of DUPLO pair none
Parent of pair(s) 5565, 5682, 5707, 7617, 93655, 93656, 93657, 93658, 93659

Gene hit At1g78090

 
Sequence (A. th genome BLAST matches underlined) 
>31-K025557-022-596-G04-8409
AGCCATTTACATTGAATATAAGGCATTGGTGTCCTTTGGTACTTTTGAGACAAGAATCCC
AGAACCTTGTCCCCTTTCACGTAAAACCTATCGAATTACACAGTTCATTTATTACGTCAG
TAATAGAATCAAATTGTTCAAAATGTAAAAAGACTTAATTAACTGATGTTACGAATACAT
ATAAGTTAAGTGTCACTATACCTTAAACGCATCTTCGTCAGTACGGTCATCCCCGATATA
CACCGGCACAACATCATCCGAATTTTCATATCCTATTTTAATTAGTCGATAAATGATATG
AGAACTTGAGATCTTTAAATTCTCATATCGAAATGAAAAATAAATAAGATTTATGAGGGG
CTCTCTCACCTAATGATTTTAGTAAAAAATTGAGTGCCTGGCCCTTGTCCCATTTGATTG
TGGGGCGGATTTCAAGTACCTGATTTTATAAATGAAATAGATTAAATAAAGATGTAATAA
ATACTTAATTAGCCTATGGGATCCTCCCTATAGTGA
GenBank Accession CR356428 [GenBank]
Graphic View Graphic view of gene At1g78090
Predicted Position of Insertion Chr1:29376125 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T11I11
Hit Gene Code At1g78090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation trehalose-6-phosphate phosphatase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR356427 [GenBank]


Last Updated on 10.06.2021 13:37