SimpleSearch - Line and FST details


Line specific information

 
Line ID 599G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N457486)
Segregation Analysis 50:41:32
Confirmed for Hit At3g28340
Parent of DUPLO pair none
Parent of pair(s) 5333, 5344, 5368, 5373, 5408, 97032, 97033, 97034, 97035

Gene hit At3g28340

 
Sequence (A. th genome BLAST matches underlined) 
>47-K023090-022-559-G06-8409
ACAATTGAATATATTCTGAATATATCACTCGGATAAGTAGCTTCTTGCGTAATTCAAAGG
ACTATCAAGAGCTTGTCTTATAGAAGAAGAGATTAGATTCTTGACCGTGGTTTCTTCNNA
GGTATAGACTTTGAAACTCNNAGAAGGAAAAACAGACGATAGGGCCCTGCCGCACCCACC
CTGCGCCCCCGACGCGGGGCGGGAGCCGCGCCCCAACCGCGCCAGCCCCCGGCACCCCAC
GCCCTCCCCCCCGCGAAGCCCGCCGGGCGCAATCCACCCACCCTCACCAGCAGCCCCCAG
CACCATCACCTCCCTCAGCTTGCACCCGCACACGACGCCCCCCACCCTCCTAGAACCCCC
ACAAGGGCCGCCGACACCGCCACCAGCCGCGCCACGCGCGGCGGAAGCAGCCCCTTCGCC
GCCCCAAGACGCCACACGCAGCGGACCCACCCGTGCCCCGCACCACCGCCGCGCACCCCC
AGCCCCTCCCTCCACCCGGAGCCACGCCCAGCCATCCACCACCACGGCCGACCGAGCAAC
CACACCCCGCCACCCGCTCGACCCACCACAGCCACGGCAGACGC
GenBank Accession BX651455 [GenBank]
Graphic View Graphic view of gene At3g28340
Predicted Position of Insertion Chr3:10590002 - go to primer design
BLAST e Value 3e-62
Hit Clone Code (BAC ID) MZF16
Hit Gene Code At3g28340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation galacturonosyltransferase-like 10
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX651455 [GenBank]


Last Updated on 10.06.2021 13:37