SimpleSearch - Line and FST details


Line specific information

 
Line ID 604B09
Vector Used pAC161
Line Availability available as T3 set from NASC (N457909)
Segregation Analysis 50:29:22
Confirmed for Hit At2g16220
Parent of DUPLO pair none
Parent of pair(s) 96630, 96633, 96634, 96635

Gene hit At2g16030

 
Sequence (A. th genome BLAST matches underlined) 
>66-K024459-022-604-B09-8409
CCATTTACAATTGAATATATCCAGAAAAAACATATTAACCTGTACAAAGCTTTTGTTCTG
GATCTTGAACTCGCAACAAACATCGCAGCTTTCCCTCAACAAAACATTGCTTTAGGATCC
AAAACAAATATGGTCATGGTCTTTGAACAATGTTACCACATAATCTGTTAAATCTCCTGC
TTTTCAAACATGTAAGTGAATTTCAACAGAAACAAATCTATGGCATCCTCCCTATAGTGA
GACCAATTTTCCGAAACTCCGAAAGGGGCCGATAGTTCACAACAAAAATAAAGCCCCTCC
CGAAAAAGAATCATAAAATTTGAATACTGTAGTAGACTTATAGAAGCCTAAAATAAAATG
ATCAATAACGAGAAAAATAAAGAAGAAGCATCAAAATCTAACAAGGAATTACCGATTGCA
ACCAAAAGATCAGAGAAGGCAAAAAAAAATAGAAAAACATTAATCAATATAATAATATTA
CAGCGGAAAGAAAACCATTTC
GenBank Accession BX943444 [GenBank]
Graphic View Graphic view of gene At2g16030
Predicted Position of Insertion Chr2:6973924 - go to primer design
BLAST e Value 4e-95
Hit Clone Code (BAC ID) F7H1
Hit Gene Code At2g16030 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At2g16220

 
Sequence (A. th genome BLAST matches underlined) 
>66-K024444-022-604-B09-8409
CCGGATGAGCCATTTACTCATTGCGGATGCTACAGAGTCAACGACGACTTCTCTAACCGA
GGAGATGAGAAGAATCTCCACACACCAGTTTTGTACGATGGCCAATAAGAGGCGTGGCTT
AACAAACGATCTGGTCAAGAACCACTCTTTGAAATATGGACTACCAAACATTGATGCCCA
CCGCTTTGACTCGCAATGAAACCTCGCGACTGACTTTAAAGGCAATCTTGACAAAACCTC
CAGGATGAGATCATTCGTTAAGAAATGTGAATTCATGATGGCCGATCGAACGAAGAAGAA
GGAGATTTGTTAAGACTTAAATATTAAGACACCTATGGAATCCTCCCTATAGTGAGCCTA
TAAGATCCTATGGAATCCTCCCTATACTGAGAAGTTATAATAAAACCTATGGGCAACCCC
CCTNTANTGACGAGGGGGATCATCGGAAGGATGAGTAGATGGG
GenBank Accession BX943443 [GenBank]
Graphic View Graphic view of gene At2g16220
Predicted Position of Insertion Chr2:7031137 - go to primer design
BLAST e Value 5e-144
Hit Clone Code (BAC ID) F7H1
Hit Gene Code At2g16220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box and associated interaction domains-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37