SimpleSearch - Line and FST details
Line specific information
| Line ID | 607C02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N458202) |
| Segregation Analysis | 50:18:12 |
| Confirmed for Hit | At3g60900 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 2640, 93704 |
| Note |
Gene hit At1g19340
| Sequence (A. th genome BLAST matches underlined) | >11-K021276-022-607-C02-8409 CCTCCCGATATGTGAGAACAGAAGTTCCTTTCTCAGATTATTCAAGTGACAAAAAAATGA ATTGACTTACTTCGGTAAAATGGTAGCCTATGGGATCCTCCCTATAGTGAGGGCTATGGG ATCCTCCCTATAGTGAGACGATGGGATCCTCCCTATTACGGGGGATACTTCCACATATTA TGGGTAGGGTGGGACACATCTCTATTTTTCCCCGGGGGAATCCTTATAATTACCACTGCT TAGCTTTCAATTCTCCTCTGACCATCAAATGAAATGTGAATAACCCGTCCTCCTCTCTTT GAAACAAGGGGCGCTTATGGTTCTGTCGGTGCTTGAAACAATTTTGTCTTCTCCATATTA CTATATCTCTAGAGTCAATAATTTTATATGANGAACTACTGAACTCAATCACTTGCTGCC GTTACTCTTCAATTTTCTGTTGANGTCTATCCTGTAAANNTACTCCAATTGAATCANTAA TCNATTTC |
| GenBank Accession | BX654570 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:6686397 - go to primer design |
| BLAST e Value | 1e-21 |
| Hit Clone Code (BAC ID) | F18O14 |
| Hit Gene Code | At1g19340 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Methyltransferase MT-A70 family protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed, line belongs to a contamination group, please check line 570E08 |
| Other FSTs Supporting this Hit | FR813131 [GenBank] |
Gene hit At2g25020
| Sequence (A. th genome BLAST matches underlined) | >11-K026183-022-607-C02-8409 GTAAGGACTATTTTAAAGAGAAAAGTGTTGGGTATGGGATCCTCCCTATAGTGAGACTAT GGGATCCTCCCTGTAGTGAGGATATGGAATCCTCCCTATAGTGAGGCTATGTTGATCCTC GCTATAGTGAGAATATATGATCTATGATTCCTGTATGGGATCCTCCCTATACTGAGTGGG TGACATTCCATCTGTATTCCGGGGGGGGGGGGCGGATAGTCTGANTCTTTAATTTAATCC CCCCAACAGATTGAATCTTGACACCACCATATTGTAGCTAACTTTAATAGGGTTAGCTCT TAACTTATAGAATGACTTAGGATGTATTGGATATTTTACTACCACACATTTTTGACAACA TAAACATATATTAATGAGAATATAATATAAAGATATTTATTCTAAATAACATATATAGAG GGGGGAAAATAAATATACTTTTTTATTCTCCATAATAACATATAATATCTCCCAATAGAA AAAAAAAGAATTTCTAACTCTAATTATATTAATATCATTAAATAATATTATTTTAACATT A |
| GenBank Accession | FR813132 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:10639976 - go to primer design |
| BLAST e Value | 9e-04 |
| Hit Clone Code (BAC ID) | F27C12 |
| Hit Gene Code | At2g25020 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
Gene hit At3g60900
| Sequence (A. th genome BLAST matches underlined) | >11-K026184-022-607-C02-8409 AACCATTTACATTGAATATTACTGGTATCGGGTTTGCACCCTAGAGTGAGGGGATCAAAA CCTACTTTGCGTACTTTGAGATTCGTGACGTTAACGAATCCTAGGTTCCCGAGAGCGTGT CCGGTGGTTTGGTATAGCGTGGTGGTGAGAGTTGTGCCTTTAGAGAGCTGATGGAGTTTT AAAGGATCGTAGTAGTCGAGGAGGACGAGGAGGCTGAGATCATTTTTGACGACCGACAGT GGGTGTTTTCCGGCGAGGGAAGACATTGCGCCATTGTTGAGAACAAGGACGGTGATTGTA GTGCGGCTGTTGATTTCATCGGCAACTTTTGTTTGAGTAAGGTACTTGTTGATTGACGAA ATATTCCGGTGTATCTCAGAATATTTGAGTAACGTTATGGCCTAAAAATGGGGGGGGGGT TTTAAATAAATTTATTTTGAGAA |
| GenBank Accession | CR398019 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:22500404 - go to primer design |
| BLAST e Value | 2e-137 |
| Hit Clone Code (BAC ID) | T4C21 |
| Hit Gene Code | At3g60900 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | FASCICLIN-like arabinogalactan-protein 10 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX654571 [GenBank] |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
