SimpleSearch - Line and FST details


Line specific information

 
Line ID 609A07
Vector Used pAC161
Line Availability available as T3 set from NASC (N458375)
Segregation Analysis 50:48:38
Confirmed for Hit At5g45670
Parent of DUPLO pair none
Parent of pair(s) 2064, 6074, 6172, 6187, 6235, 6252, 94552

Gene hit F17A8

 
Sequence (A. th genome BLAST matches underlined) 
>49-K021864-022-609-A07-8409
GNAGCCATTTACAATTGAATATACTCCGACAAGAGGTAACCTGGCGTACGGGTATCACTC
CGTATTACGCTACTCGTGGCCTCTGAATCTATCATCGGAGGAATCCTTGGATGCACTCCC
CATGGGATCTTCCCTAGGGAGAGACCCTATAATGAGTCCTATTACTCATGGTATACCGAA
AATCTTAACACAATTAGTTGACAGTAATTTGTAGGATCACTGATACTAAAAACCATTATA
GCCCTTTATAATTGGAAAAAAAATCTATATAATTTTGTTGTATTGTTAAAAAAATCAATT
CAATAATCCACCCTCTTTTTTTCTTCCTTTTTTGGTTAAAATAACAATCCTCGGCCTATG
GGATCCTCCCTATAGTGAGANAANNNANTNNAANANAAGGAGGTATAAAGAAANTAAGCT
TTGTTGAAATGTCAAAATTGACTTTTGATTTATTA
GenBank Accession BX655876 [GenBank]
Graphic View Graphic view of sequence BX655876 of line 609A07
Predicted Position of Insertion Chr4:6217959 - go to primer design
BLAST e Value 3e-28
Hit Clone Code (BAC ID) F17A8
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g45670

 
Sequence (A. th genome BLAST matches underlined) 
>49-K021863-022-609-A07-8409
ATCCTGAGAATGGGTATGGGATCCTCCCTATAATTGAGTATGTAGATACGCCCTACATGG
AGACAGCAACCATAATCATCATGATCATCAAACTCATTCTCGCCATCTTTTTCTATGGGA
TCCTCCCTATAGTGAGACCGATTACTCCCGGGATACCAAGAATATGGAAACTCTATGTGA
TGGTGGTTGGTCGGATCCCTGATACTAAAAACAATTATAGCCATTTATAATTG
GenBank Accession BX655875 [GenBank]
Graphic View Graphic view of gene At5g45670
Predicted Position of Insertion Chr5:18528690 - go to primer design
BLAST e Value 1e-21
Hit Clone Code (BAC ID) MRA19
Hit Gene Code At5g45670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GDSL-like Lipase/Acylhydrolase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37