SimpleSearch - Line and FST details


Line specific information

 
Line ID 609A08
Vector Used pAC161
Line Availability available as T3 set from NASC (N458376)
Segregation Analysis 50:45:33
Confirmed for Hit At1g15180
Parent of DUPLO pair none
Parent of pair(s) 7713, 7726, 7727, 8794, 8802, 11392, 91595, 91610, 91623, 91640, 91649, 91662, 91671, 91672, 91673, 91674

Gene hit At1g15180

 
Sequence (A. th genome BLAST matches underlined) 
>57-K021863-022-609-A08-8409
CCGGTGCCGTTATGCGAACGCCTCTGCTTACTCTTGGGACGGGATGCAGAAACTGGGAAA
GCCAGGTACAAGATCTTTTTCGTTCTTTTCTTCTTCCTGACTAGTTTCCCTTGTGAAATA
AACATACAGATCTTGAATTGGATGCATATTTGAACTGTAGGCCGATAAAGCGAGAAATCG
AATGGCTTTGGCCTATGGAACGTAAGGCGCTGCATAACAGCTAAAGATCATAGTGAGCAT
AGGTTCCTCCGGTTTTACCAGTTTTGTAGCAGACGAATTGCTGTATGTTACTTTGTGGTT
ATTGGAAGGTTTGGTTGTAATAATACTGCACAATTTTCATCAGTATTAATAAGCATCCTT
CTTCTAAAGAACATTCAAATATACCTTGCCACGGGAAAAGATGCAAAAGAGCCTTTTATG
TGTTCCACAAGAAAGAATAATGATCAAATTCACCATCCAAGGAGAGGCAAAGAAGTGGTA
GTTCTA
GenBank Accession BX655877 [GenBank]
Graphic View Graphic view of gene At1g15180
Predicted Position of Insertion Chr1:5226327 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F9L1
Hit Gene Code At1g15180 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MATE efflux family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX655878 [GenBank]


Last Updated on 10.06.2021 13:37