SimpleSearch - Line and FST details
Line specific information
| Line ID | 613E06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N458806) |
| Segregation Analysis | 50:48:37 |
| Confirmed for Hit | At1g08700 |
| Parent of DUPLO pair | 91 |
| Parent of pair(s) | none |
Gene hit At1g08700
| Sequence (A. th genome BLAST matches underlined) | >45-K021998-022-613-E06-8409 ATAACAAAATAAAAGTGCACCCATGTCATCATATGATCACTGAGTAACAGGCATACACAG TCATCATATCATACATTGCTGCCCTACCAACAAGAACACTGTAAAAAATAAAGTCTCCAA GACCAAGTTTTATGCCTCTATTTGAAATGTCCACAACATAATCCGACTCCTCCAAACCTC TTGCTTCTTCCCTATTATCTCCCCAAACCAATCAATTCAACTATGGAATCCTCACTATAT TTAGCTAAAAATCTTCACAACCCAAAAAAAACCAATTTTAACAATACTTAATTAAAGTCA ATTAAAATAATAAATATTACATCAATAACTCATAATAAATAGAATAAATCAACTCTAAAT AAAAATTAATCAAAAATAAATACTCTAAAATTTATAAACTATATAAATAAATAATCTACA AAATAATTAAAAAATTATAAATAAAGAAAATTAACGTAACCTAAAATGTAACACTTTAAC CCAATACAAAATACTAATAA |
| GenBank Accession | BX656307 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:2769975 - go to primer design |
| BLAST e Value | 4e-80 |
| Hit Clone Code (BAC ID) | F22O13 |
| Hit Gene Code | At1g08700 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Presenilin-1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | FR813261 [GenBank] |
Gene hit T5I7
| Sequence (A. th genome BLAST matches underlined) | >45-K021521-022-613-E06-8409 TGGGATCCTCCCTATAGTGAGAAGAGAAAAGATCAGTAATTACCAATAAAGNCTTCTCTT TCTTCGGCCATATGGAAGACTATGGTATCTTCCACTATTGGAGTTCAACGAAGAAACTCC TAATTTTTAAATTAATATATAATGTCTACCTACGCCCACAAATAGTGCCCCTATGGGATC CTCCCTATAGTGAGANANNNNNNNNNANTACTTTTCTATATTGNGNNNCNTTTGTGGTCC TTCCCNCCGTAGTGTCTTTTGTATTTTTTTCCTCTGCATTCCTGTATTTGAATTTACGTT TCTCCAATAAATTGTCTTTTTCTTCCTTTCTCCACGAGACTTTAAT |
| GenBank Accession | BX656306 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:16642306 - go to primer design |
| BLAST e Value | 1e-12 |
| Hit Clone Code (BAC ID) | T5I7 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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