SimpleSearch - Line and FST details


Line specific information

 
Line ID 614B03
Vector Used pAC161
Line Availability available as T3 set from NASC (N458863)
Segregation Analysis 50:49:42
Confirmed for Hit At2g47610
Parent of DUPLO pair 976
Parent of pair(s) none

Gene hit At2g04842

 
Sequence (A. th genome BLAST matches underlined) 
>18-K021894-022-614-B03-8409
NNTTTCGTGGATATTCCGGACATNAGCCATTTACAATTGAATATATCCTGAACTTCCCCA
CACTCACGTGTGATGTTAGGCCTCGCACTTGGAAAATTGTTCGCCTTCACCCAAATATCG
TCCCACTCATTGTGACTTATCTTGACTAACTGCATATGGGATCCTCCCAATAGTGAGATC
CAAACCTCGACAATATCTCTTCTGTGAGATCTAGAACACCTCTGATCTCATCTTTGATCT
GATCCTCTAAACAAAATATGTGTGCATCGTCCTGGAAGTAAAAATGTCAACTAAGTTAAT
CCTATGGGATCCTCCCTATAGTGAGACGTATTACTCGCCCCTTTTGCCCTNAATGGCCAC
CCTCTAAGTGAGCGTCCCTATTCTGAGTCTAAGAAACCCATTGTAGTCGAATACGGCCTC
AACCATGTGACCTAACTCATTGAGCAAAACAAGGCCCAACTTGATGTTATTGCTCAAAAT
GACGACCCAGTTGTGTTGGTTGT
GenBank Accession BX656368 [GenBank]
Graphic View Graphic view of gene At2g04842
Predicted Position of Insertion Chr2:1699179 - go to primer design
BLAST e Value 8e-66
Hit Clone Code (BAC ID) F28I8
Hit Gene Code At2g04842 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation threonyl-tRNA synthetase, putative / threonine-tRNA ligase
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At2g47610

 
Sequence (A. th genome BLAST matches underlined) 
>18-K021890-022-614-B03-8409
AGCCATTTACAATTGAATATATCCTGAGCTTACATACCTCGCTTATCATCTAAAGCATCT
CTAAGGGCACAGGTCGCCTTCTCCCATATATCATCACCTCCAACTGATTTTTCAGGTCTA
TGGGATCCTCCCTATAGTGAGTTGTAGAATCCAAACCTCGACAATATCTCTTCTGTGAGA
TCTATGGGATCCTCCCTATAGTGAGAAGAATTCCGTGCCTTATTTATATTCCTTATTGAT
ACTTGCAGCTACCAGCCTCTTCAAGGTCCTTCTGAAGTACAGGCCAGAAGACAAAGCTGC
CAAGAAGGAGCGTCTTGTAAAGAAGGCCCAAGCTGAAGCTGAGGGAAAGCCTTCTGAGTC
TAAGAAGCCCATTGTAGTCAAATACGGCCTCAACCATGTGACCTACCTCATTGAGCAAAA
CAAGGCCCAACTTGTTGTTATTACTCAAGAAGTCNACCCAATTGAATTGGTTGTAAGATT
GCAAACTGTGTGCAAAAAGATAGAATTTA
GenBank Accession BX656367 [GenBank]
Graphic View Graphic view of gene At2g47610
Predicted Position of Insertion Chr2:19530492 - go to primer design
BLAST e Value 2e-128
Hit Clone Code (BAC ID) T30B22
Hit Gene Code At2g47610 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37