SimpleSearch - Line and FST details


Line specific information

 
Line ID 614F01
Vector Used pAC161
Line Availability available as T3 set from NASC (N458909)
Segregation Analysis 50:48:30
Confirmed for Hit At2g19760 At2g19780
Parent of DUPLO pair 2538
Parent of pair(s) 743, 3685, 8187, 9839

Gene hit At2g19760

 
Sequence (A. th genome BLAST matches underlined) 
>06-K021890-022-614-F01-8409
GAAGCCCTTTACATTGAATATATCCTGAGTACATCACAATCCGATTGTGCTGATTTCATG
TTCCCAAATCAGACGATATGCTAGTGATAATGTGTGTTTTGATGAAACCTCCAGATACCG
TTGGAATCCTCCATGACTTTGAGGAGACCGGGTTTCTTGCCCCAACCGGAGGATTTCTCG
GTGGCGAAAAATACATGGTTATCCAAGGTGAACAAGGAGCTGTGATCCGAGGGAAGAAGG
TAACTTTCTTTACTTCATACATCAGAAAGCTGCATGTAGATTTTGATACAGAATAGAATC
GGAATTCATGTAACAATCTGTGAATCTTCAGGGACCTGGAGGTGTCACTATCAAGAACAC
AAACCAAGCTTTGGTCTTTGGCTTCTACGATGAACCAATGACTGGAGGTCAATGCAACTT
GATTGACAAAAGGATCAAGGATTACCTTA
GenBank Accession BX656416 [GenBank]
Graphic View Graphic view of gene At2g19760
Predicted Position of Insertion Chr2:8517508 - go to primer design
BLAST e Value 6e-153
Hit Clone Code (BAC ID) F6F22
Hit Gene Code At2g19760 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation profilin 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g19780

 
Sequence (A. th genome BLAST matches underlined) 
>06-K021894-022-614-F01-8409
GNAGCCATTTACATTGAATATATCCTGAGAACCGGAGAATCTGTTGTTGCTGAGATCGAG
TTCTTGAAGAGAATCAAGATTCTTGAAAGAATCTGGGATTTGACCAGAGAATCTGTTACT
GTTGGGATCCTCCCTATAGTGAGTCGTATTACTCACGGGTTTGCCCCTGAATGGTGACAC
ACTGGGGTGCTCCCTCTAGGGGGGCGATGGGGTGCTCACTCTGTCCGCCTCTCAACCGAG
GGGATCCTCGTTGGTTGTATAGCCAGAAGGCACTTGGATTTTAAAGTAACGCTGCGGACA
TCAACATCCGGGGACTCCAAATAATGACTCTGGGTTGGTCCGGATAAGGAGGCGACAGAA
GTGGAACACGTGGGCGGGTGAACCTGAGGACCGAGCACATCGGGAGAGCACCCGAAAGCG
GAAGTGCCAAAAGAGACATATTATGGGACAAGAAACGACGGCACATATAGAAGGAAATCC
AAGTAGCCGAGATAAACAGAATAAACAACAAAACA
GenBank Accession BX656417 [GenBank]
Graphic View Graphic view of gene At2g19780
Predicted Position of Insertion Chr2:8523524 - go to primer design
BLAST e Value 6e-48
Hit Clone Code (BAC ID) F6F22
Hit Gene Code At2g19780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat (LRR) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37