SimpleSearch - Line and FST details
Line specific information
| Line ID | 617F12 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N459208) |
| Segregation Analysis | 50:30:24 |
| Confirmed for Hit | At3g05130 |
| Parent of DUPLO pair | 1008 |
| Parent of pair(s) | none |
Gene hit At3g05130
| Sequence (A. th genome BLAST matches underlined) | >74-K118365-0022-617-F12C-8409 CATTACATTGAATATATCCTGATCAGTGTTCAAATCCCTCAAAACCTTCTCTTCCTTTGT CAAACTCCGCACAGTCTCATTCAACTTGTCTAACTTTCTCTCCAGCTCCTCGATTACTCC TTTTTGTTCAATCTTTACAATCTCCATCTCATTCTTCTCACTTAAAAGCACTTTGATCTC TCTCTTCAATCCATCAATCTCATTCTTCTTCTCCTCCATTATCTTCTCCAGACCAATCTT CTCCTTCTTTACCCCTTCAATCTCCTCTTCTCTCACCTTCCTCTCCTTCACCAATCTCTC ATTTTC |
| GenBank Accession | HG969063 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:1434459 - go to primer design |
| BLAST e Value | 5e-155 |
| Hit Clone Code (BAC ID) | T12H1 |
| Hit Gene Code | At3g05130 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | paramyosin-like protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX656671 [GenBank] |
Gene hit At5g09513
| Sequence (A. th genome BLAST matches underlined) | >94-K021917-022-617-F12-8409 CCTTTACAATTGAATATATCCTGTAATAATTAAACAAAAAAACCCATAAAAATTCTTATA GTTGATGTTGCTTTTTCTTGGACTCACAAATAGTTTATCAGTGGCTCTACAAAGGAAAGA CCAAAACATTTTGAATGCTATGTCACTATGGGATCCTCCCTATAGTGAGATACACTGANC TGTTATCTCACATGTGGACGTGCACGTCCAAATGCTACAGGATCCTCCCTAGATAGAGAA AAAATGCAATGATCTTTCCATAATTACAGGCCTTATTAGCCGTAGAATTTATAGGCGAAA CCAAGAAACAAGATTATTCTGATTCGGAAATCTTTATTTCGGCGTGTCCACATTCACGTC CAAAAGGGTGAGTAATATCACTTGGGGTAGAGAATATCCCGTCGATCTAGAGGGTGGCAG AAACCATATGATATAACAACACCACGAGATTATCCAAATAATCTCGAGTAAGGGGGACGA TCAACAAAATATAAAGACAANTAAATTAGATAAACATAAAATATAGAAAAGGAA |
| GenBank Accession | BX656672 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:2958063 - go to primer design |
| BLAST e Value | 3e-53 |
| Hit Clone Code (BAC ID) | T5E8 |
| Hit Gene Code | At5g09513 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | 5' region |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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