SimpleSearch - Line and FST details


Line specific information

 
Line ID 617H11
Vector Used pAC161
Line Availability available as T3 set from NASC (N459231)
Segregation Analysis 50:43:34
Confirmed for Hit At5g44840
Parent of DUPLO pair none
Parent of pair(s) 67670, 96728, 96729

Gene hit At5g44840

 
Sequence (A. th genome BLAST matches underlined) 
>88-K021913-022-617-H11-8409
ATTCGGACTGAGCCATTTACATTGAATATATCCTGGAAATAACCTCATTCAACAGTCCAA
AAAACCATATATCGATTAGCGAATGCAAAAGAGTTAAAATAACGAAGATAAAACTCGTAG
CACCCCACGATAGTCCTAACACTGATGGAATTAATATCTCAGAATCAAGTGATGTCGATA
TATACGACACAGTTATTGGAACTGGTATATATAGCTATGGGATCCTCCCTATAGTGAGAC
TAAGGGATCCTCCCTATATTGGGGTTTAGTGATTTGGTGGGTCTATGGGATTCTGGCATT
AGTGGGATTATGGACTTTTTTAGATGGTGGAGATTTTGGAATTATTGAATTGTTGGGATC
TTTGCCTTTATGGGCCAATGGACTATCTTGATGGATAGAGCCATTTTAAATTATTATCGC
ATGAG
GenBank Accession BX656681 [GenBank]
Graphic View Graphic view of gene At5g44840
Predicted Position of Insertion Chr5:18105966 - go to primer design
BLAST e Value 2e-97
Hit Clone Code (BAC ID) K23L20
Hit Gene Code At5g44840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pectin lyase-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX656682 [GenBank]


Last Updated on 10.06.2021 13:37