SimpleSearch - Line and FST details


Line specific information

 
Line ID 620A03
Vector Used pAC161
Line Availability available as T3 set from NASC (N459427)
Segregation Analysis 50:42:29
Confirmed for Hit At2g27370
Parent of DUPLO pair none
Parent of pair(s) 1083, 3937, 9876

Gene hit At2g27370

Sequence (A. th genome BLAST matches underlined)
>17-K021954-022-620-A03-8409
NNTTCAGTATCCGGACATGAGCCATTTACAATTGAATATATCCTGAATTTCGAGCAGTGT
GCTTGGTGCTTATTAGGGATTTAATTATGGTACATGATTTTCAATTATATAAAGATTCAA
ACTTATATCACTTTTTTTTATTGTTTTGGTTGACACACCTGTTATGATCCCAAACTCGAG
CGTGGGTGGCTACCTAACCCTCTCATTGCCTTTTTCTATAGTCTGTATCCTCCGCCCCCT
CGCGGTGCCGCCTATGGGATCCTCCCTATAGTGAGACGATGAAAACAACCGCGCACAATA
GACCACGCCGACCAAGAAAACCAAGAAGAAACACAAACACTAAACAACAGAAGGAAGGAA
CTCAACCCACCAAATCAAGCGACGAACACACCAACAGAAAAAAAAGAAATCACACAACGA
CCGGGAACAAAACCACCACCAGAAGCGGGGGACAAAAACAGAACTAATAGTCAATAACAA
CGCCGACCAAATCGCAGTAAAACACACAACAAGAACAAAGGGAGCCAAGACCTTACCGAA
CAGGCCGGACAAACCGAGAAAGAATGAAACCAAA
GenBank Accession BX656804 [GenBank]
Graphic View Graphic view of gene At2g27370
Predicted Position of Insertion Chr2:11709349 - go to primer design
BLAST e Value 3e-68
Hit Clone Code (BAC ID) F12K2
Hit Gene Code At2g27370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Uncharacterized protein family (UPF0497)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details