SimpleSearch - Line and FST details


Line specific information

 
Line ID 620B11
Vector Used pAC161
Line Availability available as T3 set from NASC (N459447)
Segregation Analysis 50:46:28
Confirmed for Hit At5g21080
Parent of DUPLO pair 12450
Parent of pair(s) none

Gene hit At5g21080

 
Sequence (A. th genome BLAST matches underlined) 
>82-K021954-022-620-B11-8409
NGGCAGTATCCGGAATGAACCATTTACATTGAATATATCCTGGAGACATCGAATCATATC
CCTCCGGGCATGCAGTGATTGCCAGGGATGGGGGAACTTTAGTCTGTTGGGCGAGTGCAG
TATCAACATAAACTATTTCAGGTTGCATTCTATGGGATCCTCCCTATAGTGAGTCGTATT
ACTCAGGGGGCTGAGCAGAATTGGTAGCACAGTGGGGAGGGGGGGAGAGGAACATCTAGG
GTGGAAAAGTATAGGAGTGGAAAGAGGGAGTCGGATCATTAAGAATTCGGAGGAAATAGA
TAAAAGGAAGAGTATGGGGCAAAAAGGCGGTATGTGTGAGCACTATAAAAAAAGTAATGA
ATAAGAGATTGGGTTAAGTGAAGCGGACAATAGCAAGGGAAGCGGGGGGGGAAAGATAGA
CAGGTAGGTGTGGATGGAATGGGAGAAGAGAGAGGGAGAGAGGATAGGAGATGGTATATT
CACGCCCCCCGTAGAGGTGGAGAATAGACATGAAAAAAAGAGAGGGGGGGGATAAGAAGA
TCTGATAGGCGAGTGTTAGTATCGGGAAAATAGTAAGACGACGGGAAAGGAGAGAGAAGA
GAAGGAA
GenBank Accession BX656816 [GenBank]
Graphic View Graphic view of gene At5g21080
Predicted Position of Insertion Chr5:7160797 - go to primer design
BLAST e Value 1e-21
Hit Clone Code (BAC ID) T10F18
Hit Gene Code At5g21080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Uncharacterized protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX656816 [GenBank]


Last Updated on 10.06.2021 13:37