SimpleSearch - Line and FST details


Line specific information

 
Line ID 623B03
Vector Used pAC161
Line Availability available as T3 set from NASC (N459727)
Segregation Analysis 50:48:47
Confirmed for Hit At3g45275
Parent of DUPLO pair none
Parent of pair(s) 85549, 85554, 85561, 85564, 85565

Gene hit At3g45275

 
Sequence (A. th genome BLAST matches underlined) 
>18-K022313-022-623-B03-8409
GCCATTTACATGTAATCTTAAGCATTTCACGATACGCAAAACGCATAGGAAACAAAATTC
CAAAACAGTCTTCGGTAAGACCGAGTAGTATAAAGCAACATTCTTTTTTGACATTTTTAA
ATTTGAAATGCTTCACTGCTTCTACACAATCCGGAATTTTTCCTGCGTCTGTCGCACAAG
ACAATGGTTTTGGCAACAATCCTTTTTTTGACATTGGAGCAAAGGCAAAATCATTATTAC
CTTTCGTAATTTGGGAAATGGATAGCATCATTATCATCACTACTAAGATGGACACAGACA
CTCGCTTGTTCCCACTCATTTCAAGTGTTTATAGAATTTCTATGGGATCCTCCCTATAGT
GAGTCGTATTACTCACCGATTTACACGATAATGGAAACCCACGGACTAGCCCCATTAAAA
TGTATAAAGCAAACAAGAACATACAAAATCC
GenBank Accession BX657178 [GenBank]
Graphic View Graphic view of gene At3g45275
Predicted Position of Insertion Chr3:16606209 - go to primer design
BLAST e Value 8e-180
Hit Clone Code (BAC ID) F18N11
Hit Gene Code At3g45275 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ECA1 gametogenesis related family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX657181 [GenBank] BX657181 [GenBank]


Last Updated on 10.06.2021 13:37