SimpleSearch - Line and FST details


Line specific information

 
Line ID 623C07
Vector Used pAC161
Line Availability available as T3 set from NASC (N459743)
Segregation Analysis 50:44:38
Confirmed for Hit At3g24068
Parent of DUPLO pair none
Parent of pair(s) 12584

Gene hit At3g24068

 
Sequence (A. th genome BLAST matches underlined) 
>51-K022313-022-623-C07-8409
CATTTACATTGAATATATCCTGATGCAGATCCGATGGTTTTTGTCTATGGCAAATCAATC
CTGATGGTCTTTACCTATATGTCGCTTCTATTCAGAAATACCAAAAGCAATTCAATTGGT
GATACACCAAACAATATGCATTGTGTTATTGTATCGTTCAGTCGTATAATATAATATAAT
TATAAGATTTCTAAGGTATTTTTAAATTTATGATATGATTTAGTTCATAAGAAGAAATCA
CAGAAAAGAACTTGGTTTAGGTGTCGTAACGAAAACATACGTATGATTCAATTTTTTTTC
TTCTTCATATCACATATACGAAAGTTGGCTAACTCGATGTTATCACTTTAAGAACCGATA
CTTAACATCATCATAAATTTTTTTTTTTTTTTTAAATTAAAAAATTTCCCCTTCTTAAAA
TCGGAAAAAATTTGGGGAAACCTTGGGTTTTCCCACCCTTTTCCCTTTTTTAAAAAAATT
CCCCAACTCAAAAATTTACAAAAAA
GenBank Accession BX657225 [GenBank]
Graphic View Graphic view of gene At3g24068
Predicted Position of Insertion Chr3:8692366 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F14O13
Hit Gene Code At3g24068 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Plant self-incompatibility protein S1 family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g17810

 
Sequence (A. th genome BLAST matches underlined) 
>51-K022813-022-623-C07-8409
NNNNCGCGTAAATCCGGACAGAACCATTTACATTGAATATATCCTGTCGCGTATGTGACG
AGGTCTGATACCCCGGATCACTGATTCTCAGAATTGAGACGTGATCCCTTTGATACACGT
GCATAGATATATAGTCACAGCATGGATAGTAGTATACATACACATTTACACAGTACCATT
GTTATGTATATATTGAATCTTAATAAAGGAACTGTCCAGATTGAATGATCAGGTAACATC
ACGGAATACATACACCCGAACAGGATCCCCGTGTTCCGCTTCCCACACTCTCCTATCCAC
TCCGGCTCCCAATTGCTTCCAC
GenBank Accession BX657228 [GenBank]
Graphic View Graphic view of gene At1g17810
Predicted Position of Insertion Chr1:6129840 - go to primer design
BLAST e Value 4e-74
Hit Clone Code (BAC ID) F2H15
Hit Gene Code At1g17810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation beta-tonoplast intrinsic protein
Insertion Classification Promoter
Confirmation Status unknown
Other FSTs Supporting this Hit BX657224 [GenBank] BX657224 [GenBank] BX657228 [GenBank]


Last Updated on 10.06.2021 13:37