SimpleSearch - Line and FST details


Line specific information

 
Line ID 623G01
Vector Used pAC161
Line Availability available as T3 set from NASC (N459785)
Segregation Analysis 50:41:36
Confirmed for Hit At3g59700
Parent of DUPLO pair none
Parent of pair(s) 6309, 7804, 8850, 8861, 8862, 87726, 87826, 87881, 87922, 87924

Gene hit At3g53580

 
Sequence (A. th genome BLAST matches underlined) 
>07-K022488-022-623-G01-8409
AGCCATTTACATTGAATATGGAGGAGACGGGAGAGTCGTTGAACAAGAAAAATAATCTGA
AGCAGCCGTGGAGATAGCCGCCGTTAGCACTGTCTCCGTCGCGCCACAATCGCGCAGAGT
GTCGAATGCGTTCTCCAGGAATCTATGGGATCCTCCCTATAGTGAGTCGTATTACTCATG
GGTTTCTCCCTCAATCGAATTGCCGTATCTTTCTCAGAGATTCTCTTTCTGCCTAATATT
TCTTTTAAGACTGAGTAATTTTGGATGTCTGATACGGCCTATGGTCTATATCTCGGGTAT
GGGATCTTCCCTCTAGTGAGTCTTATTAGTCTATTGTTTGTCTGTGTGAGAGAAGTTTGG
GGTGAGTTTATTACCTACTTTCCTTCGCATTTTTTTTCCACAATTTTCGGATGCTTTTCC
CTTCTTTTAGAATTGGCTTCCGGGGATACATCCCCCCCTTTTTGGAGATAGGTTTGGGAT
CCTCGCTATAGTGAGTCG
GenBank Accession BX657332 [GenBank]
Graphic View Graphic view of gene At3g53580
Predicted Position of Insertion Chr3:19864731 - go to primer design
BLAST e Value 7e-66
Hit Clone Code (BAC ID) F4P12
Hit Gene Code At3g53580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation diaminopimelate epimerase family protein
Insertion Classification TS2TE (5')
Confirmation Status unknown
Other FSTs Supporting this Hit BX657330 [GenBank] BX657329 [GenBank]

Gene hit At3g59700

 
Sequence (A. th genome BLAST matches underlined) 
>07-K022318-022-623-G01-8409
TCTTTGATAGTGTCGAATGCTTTCTCCAGGAATCTATGGTATCCTCTCTATATTGAGTTT
AAATACTTGTCCAGGCTTCCATTAGGCATATAGTCTTACACCAAGTAGAGATTCTCTTTA
TGCCTACAGTATCCTAAAAGCCTGACTAAATTTGGATGTCTGAGACGACCAATGGTCGAT
ATCTCGGCTATGGGATCCTCCCTATAGTGAGAGGNATTCTTTCCTCCTTGTGCTGTGGTG
TAGTTGATAATGGGCAGCGTTGTGTCCGTTCATGTCAAAAGAAAATGAGTGTAGGTTTTG
ATAAAAGGAGAAGTTAGGATCCGTCCTAGTTTTGGGGGAAGGCACGACAAAGGTTATATG
GATGTCGAAAATCTTTTTTCCGACGTAT
GenBank Accession BX657331 [GenBank]
Graphic View Graphic view of gene At3g59700
Predicted Position of Insertion Chr3:22053555 - go to primer design
BLAST e Value 7e-63
Hit Clone Code (BAC ID) T16L24
Hit Gene Code At3g59700 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation lectin-receptor kinase
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX657331 [GenBank]


Last Updated on 10.06.2021 13:37