SimpleSearch - Line and FST details


Line specific information

 
Line ID 623H02
Vector Used pAC161
Line Availability available as T3 set from NASC (N459798)
Segregation Analysis 50:50:35
Confirmed for Hit At1g12100
Parent of DUPLO pair none
Parent of pair(s) 92456, 92500, 92516, 92525, 92538, 92544, 92553, 92560

Gene hit At1g12100

 
Sequence (A. th genome BLAST matches underlined) 
>16-K022488-022-623-H02-8409
AAATTGGGTGGATATTCCGGNAAGTAAGCCATTTACAATTGACTATGTTCGGAGGAGTTA
TCCTCCCTAGTCATCACCTCTAATTAGTACATTGTGGATCTCTCTATAGAATGACCTCAT
GTAACTGTCCCCCTCCCGCCTGAGGAGCACTAAGTGTTTAATGCATCCTTTTTGAAACCA
TGGGATCCTCGCTATAGAGAGTCCAATTACTCACCCGATTGTAGCGTCATCTAGACACAG
TGGGATCCCCTCTGTATTAAGATGAACTAGAGAGCGATTTCTAACTCGGATGGAATCCCG
TTAAGTGATGATTCAGAAGAATAGTTTTTGGAGAAGAAGATTTCACACGGTTCTTTGTTT
TCCTAAGAACATAAACAGTAATCATGTGTGGGGGTGATAAAATTAGAGTAAATTGATTTA
AAATACAGTTTGAATTGGGATTGGGAATCCAGGTGAATGACTCAATTGGATCATCTAAGA
TCCATAATCTCC
GenBank Accession FR813477 [GenBank]
Graphic View Graphic view of gene At1g12100
Predicted Position of Insertion Chr1:4095309 - go to primer design
BLAST e Value 0.055
Hit Clone Code (BAC ID) F12F1
Hit Gene Code At1g12100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX657385 [GenBank] FR813477 [GenBank]


Last Updated on 10.06.2021 13:37