SimpleSearch - Line and FST details


Line specific information

 
Line ID 624F12
Vector Used pAC161
Line Availability available as T3 set from NASC (N459880)
Segregation Analysis 50:13:10
Confirmed for Hit At1g78850
Parent of DUPLO pair none
Parent of pair(s) 65538, 95709

Gene hit At4g24840

 
Sequence (A. th genome BLAST matches underlined) 
>94-K022319-022-624-F12-8409
CCAACCTTCCATAGCTCCTTACGTCTCTGCCCTTTGACACTCTCCGATCTGAACTCCGTC
CCCCTCTTGCATCCCTCAACCGAGACCTTGACTCTCTCCTCAAACGAGACTATGCCGATT
TCGTACGTTCACCCACTAAACTCGTACATATCTTATGCTTCTGTGGTTACTATGCCCGCT
CACCCCCTTAAGCTCCGGGAGACTAGCTATGGATTTCGAGCATCTGTAACAGCGGCACCT
TTTAGAACCAAACGAATAGGATAACGAGACTAAAGATAACATACAAGTCGACAAAACGAT
GTGGTAAAGAAAAAGAGCAACAGAGAGACGTAACCGAAG
GenBank Accession BX657531 [GenBank]
Graphic View Graphic view of gene At4g24840
Predicted Position of Insertion Chr4:12800907 - go to primer design
BLAST e Value 1e-15
Hit Clone Code (BAC ID) F6I7
Hit Gene Code At4g24840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation oligomeric golgi complex subunit-like protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g78850

 
Sequence (A. th genome BLAST matches underlined) 
>94-K022001-022-624-F12-8409
TGTTTTTGGGTGCGTTAATGGATTTTGGTGTGTTTCTGGTATAAACCCAAAGCTTCGATT
TATAAGACGAGCCCAGGAACTCTTTGTTTTTTTGTGGGTCACATGACATCTTAACCAGAA
TTGACAACTACTTTTTCGGCTTAGATACACAATGGCAAAATAATATCGTCAGTCTCAGAG
AAACAGAAAAACACAGCAAGAACAATGCAACCACCATAGAACCGGTAAAACTTAACAACA
TCATCACAATTATAACAATTAACCACCATCCATACTTTATATTATATAACACCTAAGATG
AAATTAATACATAAAAACCAATAGATATAGCCTAACAGGAATAAGATGACACAAACCAAC
TTCAAGTAAATAAAATACAACACGATACGTACCGAGATACACAACGCATTAAGAATAATC
AAGACAATCAATATTAATCACATACGTA
GenBank Accession BX657529 [GenBank]
Graphic View Graphic view of gene At1g78850
Predicted Position of Insertion Chr1:29643384 - go to primer design
BLAST e Value 1e-12
Hit Clone Code (BAC ID) F9K20
Hit Gene Code At1g78850 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX657529 [GenBank]


Last Updated on 10.06.2021 13:37