SimpleSearch - Line and FST details


Line specific information

 
Line ID 625G10
Vector Used pAC161
Line Availability available as T3 set from NASC (N459986)
Segregation Analysis 60:43:32
Confirmed for Hit At5g46350
Parent of DUPLO pair none
Parent of pair(s) 2073

Gene hit MLE2

 
Sequence (A. th genome BLAST matches underlined) 
>79-K022316-022-625-G10-8409
NNNNCCAGTCGTATTCGGACATGAGCCTTTACATTGAATATATCCTGATAGAGTAAATTT
ATGCACCTTTCTTTTATACTATAGTACTATGTGGGGGACAACTCAATACTACATAGTCAA
CGTTATTTTCATACTATTTAATAAAATACGTATATACATATCCAATAAGATGGTTTTTGT
TTGCGCCTGCCTTACGCAAATGTGCTACCTCCCTGTCTGTGCTCTGGCACCACCGCCCCT
GATTATCCCCCTTCCTCGACGCCGATCCTCCCCGATCTCAGCATCAATACTCCAAGAAGC
TTCTCAAATGATGATCTCTTCCGTGTGCCATACACTATGGGATCCTCCCTATAACCTCAC
TATAGGGAGGATCCCATAGGCCTCCCTATAGGGGGGATCCCATAGCCCCCCC
GenBank Accession BX657686 [GenBank]
Graphic View Graphic view of sequence BX657686 of line 625G10
Predicted Position of Insertion Chr5:25399255 - go to primer design
BLAST e Value 2e-50
Hit Clone Code (BAC ID) MLE2
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g46350

 
Sequence (A. th genome BLAST matches underlined) 
>79-K022320-022-625-G10-8409
CCATTTACATTGAATAATCCTGAACAGGAGTTACTATATTTCAATTACATGAACAGGAGT
TACTATAGATGCACGACTCAGAAGTGCAACGTGAAGAATAGAGTGGAGAGATCTTACCAA
GACCCAACGGTCGTCATCACAACCTACGAGAGTCAACACAACCATCCGATCCCGACCAAT
CGTCGGACAGCAATGTTCTCTGGAACCACCGCATCTGATTATAACCCATCATCGTCTCCA
ATATTCTCCGATCTCATCATCAATACTCCAAGAAGCTTCTCAAATGATGATCTCTTCCGT
GTGCCATACGCTATGGGATCCTCCCTATAGTGAGACTGAGGGAACCCTC
GenBank Accession BX657687 [GenBank]
Graphic View Graphic view of gene At5g46350
Predicted Position of Insertion Chr5:18801800 - go to primer design
BLAST e Value 6e-156
Hit Clone Code (BAC ID) MPL12
Hit Gene Code At5g46350 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation WRKY DNA-binding protein 8
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX657685 [GenBank]


Last Updated on 10.06.2021 13:37